Gene Caci_0363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0363 
Symbol 
ID8331690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp407168 
End bp409477 
Gene Length2310 bp 
Protein Length769 aa 
Translation table11 
GC content75% 
IMG OID644953530 
ProductATP-binding region ATPase domain protein 
Protein accessionYP_003111157 
Protein GI256389593 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.518292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCGG CGGACCGCGT CCAGGAGGCG CCGCCGCGTC CCGGGCACGG CGCACCGGGC 
CGGCACTCGG CCTACAACGC CGCGGGCGCG GAGCGCCGGC CGGCGGGCCG ACGGCCGACC
GCCTGGGTCG TGGCTCCCTC GGTGTGCTCG GCGGTGCTGG CCGGCGCCGC GATCGTCCTC
GTCGTCGACG GCGCGCACTC GGCCGGCTAT CACATAAGCA GCGGCACGAT GACCGCCGTC
TGGGTTCTCG GCGGTCTGAT ACTCGCGGTC GTCGCGGCCA CCCTCGCCTT CGCCGGGCGT
CCGGGCCGCG CGACCGAGAT CCCCGCCTTC GGCGGGCCCG ACCCCCGGCA GGCGCCGCCG
CCGATGGCGC AGCCCCAGCC CCAGCCCCAG CCGCAGCCGC ACCAGCAGCC GCAGCACCAG
CAGCACCGAC CCCAGCCCGC CCCGGCTCCG CTGCCGCAGC AGGCTCCGCC GCCGCCCCCG
ATGTCTCCGC AGGTCGTCGC GAACGCCACC GAGGCCGCCG CGACGCTGGC CGCGGCGACC
AAGGCCGCGG CCGGTCCGAT CGCCGTCTCC GAGGAGGGCG TGGACCTGCA GGTCATCTTC
GCCCAGCTGG TCCGCCGGCT GCTCACCCTG GTGCTGCAGC AGATCAACCG GCTCGACGAG
CTGGAGAACG AGGTCGAGGA CCCCAAGCTC CTGAAGTCCT TGTTCGGCAT CGACCACCAG
GCCACCCAGG TCCGCCGCTA CGGCGAGAAC ATCGGGGTGC TGGTGGGAGC CCTTCCGCAG
CGGCAGTGGA CGCACCCGGT CCCGGTCACC GTGGCGCAGC GCTCGGCGGT CTCCGAGACC
CCGGACTACC CCCGCGTGCA GGTGATCCCG CGGGCGCCGG GCCGCATCCA CGGCCACGCC
GTCTCCGACG TCATCCACAT CCTGTCCGAG CTGGTCGAGA ACGCCACCAA CTACTCGAAC
CCGACCACCA AGGTCACCGT CGGCGCGCAC CGGGTGTCCG CGGGGTTGGC GATCGAGATC
AACGACCACG GCATCGGCAT GGAGTCCGAC CAGTTCCGGC GGCTGAACAC GCTGCTGCGC
GACCCGTCGG GGGCGAATGT CAAGGATCTG CTTTCCCAGG GCCGCATCGG CCTGTCCGTG
GTCGCGAAGA TGGCCCAGCG CCACGGGATC GCGGTCGAGC TGGCGCCGAA CGTCACCGGC
GGCACCATGG CGCTCGTGGT GATCCCGGAC GCGCTGCTGG CGGCGGAGGA GCTGCCCGCG
GACAAGGGGC ATCAGCCGCG CCGCGGCATC GACCACACGC AGCTGCCGGC CCGGCCGGCG
CTCGCGCCGC TGCCGGACAC CCTTCCGCCG GCCACGACCT CCTCGACCGC CTCGACCGCT
GCCACAGCCC CGAGTTCGGC CGCCTCGCTG TCCCCGGTCG CCGCCTCGAT GCCGCCCCCG
CTGTCGTCGC CGGCCACCGC GCACGTCCCG CCGCTGCCGA CCTCGCCCGC CGCCGCGGCG
CAGGAGTCAG CCCGCGCCGG CCAGCCGACA CCGATCCGGG CCACGCCGCC GCCGCTGCCG
ACGTCACCGC TGCCGACCTC GCCGGCCGCC GCGGACCAGG CCGCCCGCAC CGCGCAGCAG
GGCTACGCGC AGCCCGACTC CTTCCAGTCG GGCCAAGGCC GCCAGGCATG GTCCCAGCCG
GCTCCCGCCG AGCCGCAGTG GCCGTCCATC AACCCGCCGG TGACCGGCGG CGCCTCCGCG
CCGACCGCCG CCGCGCCGGT GCCGGGCCCC ACCGGCTCCG TCGCGTCCTT CCAGGCGCCG
TCGGCCGACA TGTATCAGGG CTCGGAGTTA GGCGCCGCAG CGCCGGCGCA GACCGATCGG
TACCCGGCGC AGGACTTCGG GACACCGGCG CCGGCGCAGC CCGACCGGTA CTCCCTTCAG
GGCCCGGACA CCGCCGTGCT GCCGCTGACC CCCGACCGGT ACCCCGCGCC GGGTACTGGT
ACCTCCGTGC CGCCGTGGTC CCGCCTCGGC GACCGGTCCG CGGCGGGCGA GCAGGCTTCC
GAGCCGGCGT CCGAGAAGGC TCCGGGCCTG TTGCCCGACG GCCGTCCACA GCTTCGCCGC
CGTACCCCGC AGGGCCACAT CTCCGCGCGG CTGCTCCAGG CCGAGCCGCA GGAGAACCCG
CACGGCGGCG GCGCGCTTTC CCCGACGATG ATGTCGGACT TCTGGCAAGG CCTTTCCTCG
GGCATCGCAC CGGCCGGCCC CCCGGCGGCC GGCGCGGACC CTTCGCAGCA CGATCGCACC
ACCGCGAACC GTCAGGAGTG GAACCAGTGA
 
Protein sequence
MTAADRVQEA PPRPGHGAPG RHSAYNAAGA ERRPAGRRPT AWVVAPSVCS AVLAGAAIVL 
VVDGAHSAGY HISSGTMTAV WVLGGLILAV VAATLAFAGR PGRATEIPAF GGPDPRQAPP
PMAQPQPQPQ PQPHQQPQHQ QHRPQPAPAP LPQQAPPPPP MSPQVVANAT EAAATLAAAT
KAAAGPIAVS EEGVDLQVIF AQLVRRLLTL VLQQINRLDE LENEVEDPKL LKSLFGIDHQ
ATQVRRYGEN IGVLVGALPQ RQWTHPVPVT VAQRSAVSET PDYPRVQVIP RAPGRIHGHA
VSDVIHILSE LVENATNYSN PTTKVTVGAH RVSAGLAIEI NDHGIGMESD QFRRLNTLLR
DPSGANVKDL LSQGRIGLSV VAKMAQRHGI AVELAPNVTG GTMALVVIPD ALLAAEELPA
DKGHQPRRGI DHTQLPARPA LAPLPDTLPP ATTSSTASTA ATAPSSAASL SPVAASMPPP
LSSPATAHVP PLPTSPAAAA QESARAGQPT PIRATPPPLP TSPLPTSPAA ADQAARTAQQ
GYAQPDSFQS GQGRQAWSQP APAEPQWPSI NPPVTGGASA PTAAAPVPGP TGSVASFQAP
SADMYQGSEL GAAAPAQTDR YPAQDFGTPA PAQPDRYSLQ GPDTAVLPLT PDRYPAPGTG
TSVPPWSRLG DRSAAGEQAS EPASEKAPGL LPDGRPQLRR RTPQGHISAR LLQAEPQENP
HGGGALSPTM MSDFWQGLSS GIAPAGPPAA GADPSQHDRT TANRQEWNQ