| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0354 |
|---|
| Symbol | |
|---|
| ID | 8331681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 398804 |
|---|
| End bp | 399820 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644953521 |
|---|
| Product | transcriptional regulator, AsnC family |
|---|
| Protein accession | YP_003111148 |
|---|
| Protein GI | 256389584 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.225314 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG ACCAGCGCGT CGAGGAGTTC GACCGCCTCG ACCGCCAACT CGCGCAAGCC
CTGATGATCG ACGGCCGCGC CTCGTTCAGC CGGCTGGCCG AGGTGCTCGG CGTCACCGAC
CAGACCGTGA CCCGCCGCTA CCGCCGCCTG CGAAGCGGCG GCCTGCTAAG GGTGATCGGC
CTGCCGCTGG GCAACCGCGT CGGGCTCTAC CAGTCCAACG TCCGCGTCCA GTGCGTCCCC
GGCGCGGCCG GTGCGATCGC CGACGCGCTG GCCCGCCGCC GCGACATCGG CTGGGTGACG
ATCAACGCCA GCGGCACCGA AGTGTCCTGC ATGACCCGGT CCCCCTCCCG GCGCGAGCGC
GACTTGCTGC TGCTCGACAA GCTGCCGCGC ACCCGGCAGG TCACCGGGGT GTCGGTGAAG
ACGATCATGC ACGCCTTCGT CGGCGGTCCC GGCGGCTGGC CGGGTCTGGC CGCCGACCTC
GGCGCGGACC AGGCCGCCGC GCTGCACCGG GACTTCCCCG AGGTCCCGGG CGAGTTCGAG
CTCGACGACG CCGACCACGC CCTGCTCGCC GTCCTGGCGC GGGACGGCCG CGCGCCGTAC
CCGGAACTGG CCGCCGCCGT CGGCAAGTCC GAGTCGACCG TCCGGCGCCG CGTGGAGCAC
CTGATGGACA ACGGCGTGCT CTACTTCGAC GTCGAGGTCC TGCCGGTCCA CCTGGGCTTC
CACGTCGAGG CGATGGTGAG CGCGGCGGTG GCGCCCTCGG ACCTGGACGC CGTGGGCCGC
GCGGTCGGCT CGCACCCCGA GGTCCCGTTC GCCGCCGCGA CCACCGGTCC CACCAACCTG
GCCGCCGTCG TGGTCTGCCG GGAGATCCAG GATCTGTACG AGTACGTGAC CGGCCGCATG
GGTGCGATCA AGGAGATCGG GCAGCTGGAA GTGGTGCAGG TGCTGCGCAC GGTGAAGCGT
GCGGGCCTGC TCACGGACGG CGTGCGGCTG TTCGATCCGC CGGAGACCGT GTACTGA
|
|---|
| Protein sequence | MSTDQRVEEF DRLDRQLAQA LMIDGRASFS RLAEVLGVTD QTVTRRYRRL RSGGLLRVIG
LPLGNRVGLY QSNVRVQCVP GAAGAIADAL ARRRDIGWVT INASGTEVSC MTRSPSRRER
DLLLLDKLPR TRQVTGVSVK TIMHAFVGGP GGWPGLAADL GADQAAALHR DFPEVPGEFE
LDDADHALLA VLARDGRAPY PELAAAVGKS ESTVRRRVEH LMDNGVLYFD VEVLPVHLGF
HVEAMVSAAV APSDLDAVGR AVGSHPEVPF AAATTGPTNL AAVVVCREIQ DLYEYVTGRM
GAIKEIGQLE VVQVLRTVKR AGLLTDGVRL FDPPETVY
|
|---|
| |