Gene Caci_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0343 
Symbol 
ID8331670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp381644 
End bp382711 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content66% 
IMG OID644953510 
Producthypothetical protein 
Protein accessionYP_003111137 
Protein GI256389573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0680125 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTGC TGACGTGGAT CAGCGCGTGG GTTTTCGTGG CGGGACCGAC GAAACAGGGC 
TCGTTGTTAG CTCGGTGGGA CCGCTGGGAC GAGGGCATCT TCACCAGCGT CGCGCAGCAT
TGGTACTTCG CTGCGGGCAC CGATCCGCGG CATGTGGCGT TCTTTCCTGG GTTCCCGATC
GCTATGTGGT TGGCGCACCT GGTCGTCTGG AACTGGATCG CTGCCGGATT GGTGGTCTCG
GCGGCGGCGG GGGCGATCGC GACGATGGCT TTGGGGCGTT TGGCGAGGGA CGAGGTCGAC
GCGTCCAACG CTGACGCTGA CGCCGGCCAA GCTGCCGCGA ACGCCACGCT GTTCTTTGTT
CTCGCACCGG CGGCGGTGTT TCTGGCTGCG GGCTATAGCG AGAGCTTGTT CGCGGCGTTC
GCCTTTTCCG CGTGGGTAGC GGCACGGCGG GATCGGTGGT GGCTTGCGGG GCTCCTTGCG
GCGGGCGCGA GCACGGTGCG CGTGAACGGG CTGTTCCTTG CGGCAGCCAT CGCCTTGGAG
TTCATACTTG CCGGACGGGA GCGGCGGCAG TGGCGCCAGG CGCCGCTGCT TGTCATACCT
GCCCTGCCGG TCATCGCCTA TGTCGTGTAC CTGCACCACG AGACCGGGGA CTGGCTTGCG
TGGCAGCATG CGCAGGCCGC TGGTTGGTTC CGTACGTTCC AGAGCCCGGA ATCCGCCTGG
AACCAGACGT GGCGGGCTGC CTTTGGCGGT ACGCAGGCGG GCCACACTGC GTGGGTCTTT
CAGCTGGAAC TGATCGCTGT GGTCATCGGG CTCGCGCTCA CTGCGCTTCT CCTCCTTAAG
CGCCGCTGGC CAGAGGCTCT ATATGTGGCT CTCTCTTTGT TGGCTCTAGG GACCACTACC
TGGTTCATGT CCGTCCCTCG CGCGATGCTC CTGTGGTGGC CGCTGTGGAC GATGCTCGGC
GCGTGGGCAG CTCGGCGGCC GATGGTGCGG ACGCTCTACG TGTGCTGCGT CGCCCCGGTC
ATGGTGGGGG TGGCGTTGTT GTTCCTGTCG GGTCAGTGGG CGGGCTGA
 
Protein sequence
MAVLTWISAW VFVAGPTKQG SLLARWDRWD EGIFTSVAQH WYFAAGTDPR HVAFFPGFPI 
AMWLAHLVVW NWIAAGLVVS AAAGAIATMA LGRLARDEVD ASNADADAGQ AAANATLFFV
LAPAAVFLAA GYSESLFAAF AFSAWVAARR DRWWLAGLLA AGASTVRVNG LFLAAAIALE
FILAGRERRQ WRQAPLLVIP ALPVIAYVVY LHHETGDWLA WQHAQAAGWF RTFQSPESAW
NQTWRAAFGG TQAGHTAWVF QLELIAVVIG LALTALLLLK RRWPEALYVA LSLLALGTTT
WFMSVPRAML LWWPLWTMLG AWAARRPMVR TLYVCCVAPV MVGVALLFLS GQWAG