Gene Caci_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0333 
Symbol 
ID8331660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp372303 
End bp373931 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content70% 
IMG OID644953500 
Producthypothetical protein 
Protein accessionYP_003111127 
Protein GI256389563 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.983717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTCC CCTCCCGCCG CCAATCACTG CTGATTCTCG GCGGTCTCGG GCTGGCGGCC 
ACTGCCGGCG GCGCTTACCT GCTGGAGAAC CACGGCGGCG GCTCCGGCAA GCCGGCCGCG
AACCCTCCCA AGCCCCAGCC GCAGCCGCAG GCGCGCGGGC GTGCGAAGAG CACCTACGGC
ACCGGCGACG CCAACGAGGG CCAGGAGGGC GAGCCGAGCA ACGCCACCGG CGAGACCGTC
CCGAGCCTCG CGCTGGCCCT GGCGGACGAC GGCGCCTGGC GCCCGGACGC CACCGGGTAC
CTGGCGGTCG ACGACGAGGG CCACCAGATC AAGGGTTTCG CCTCGGCGAC CAGCATCAAC
GTCGGGGAGT CGATCGACTT CCACATCAGC GTGCGGCCGG CGCAGAGCTT CACGGTCAAG
GTCTACCGGA TCGGGCGCAG TGCCGCCGGG AAGGGCTCTG AGCTGGTCTT CACCAGTGCC
AAGGTCACCG GGAAGGTTCA GCCGGCGCTG AAGGTCGTCG CGCCGACCCG GACCGTCGTG
GCGCCGTGGC AGTTGTCGTA CACGCTGAAC GTCCCGAACA CCTGGCGCGG CGGTCTGTAC
GTCGCGACGC TGGAGACCGC GGACAAGTAC CGCAGCTGCA TCCCGTTCGT GGTGCGCGAG
GACGGCAAGC CCGCGGATCT GTTGGTGGTG CTGCCTTTCA CGACGTATCA GGCGTACAAC
ATGTACCCGG TCGACAAGGC GCTCGGCGCC AGCCTGTACA ACGCCTACCA GCCCGACGGG
AGGGAGGGCG GCGCCGACAT CTGCGCGACC CGCGTCTCCT TCGACCGGCC GTACCACCAG
GACGGGCTGC CGCGGCTGTT CGAGCTCGAC CAGGCCTTCG CGCAGTGGGT CGAGGCGCAG
CCGTACACCA TCTCCTACGC CTCGAGCATC GACCTGCACG CCGGCCGGAT CGACCCGGCG
AAGTACAAGG CGCTGGTCTT CTCAGGCCAC GACGAATACT GGACGCCGCA GATGCGCGCC
GTGCTCCAAG GCGCGCTTTC TAGGGGTGTC AGTGCCGCGT TCATGGCCGC GAACAACGTC
TACTGGAACA TCCGCCTGGA CGCCTCCCAG GGCGGCTCCC AGTACCGGCA GGTGACCTGC
TACAAGCGGC GTCCGGACCC GGCGGCGACC GGGAGCGTGG CGCCCACGGT GCTGTGGCGG
GACCTGAACC AGCCCGAGCA GCAGGTGCTG GGGTCGATGT ACACCGCGAT CATCACCGAC
ACCCAGCCGC AGCCGCTGGT GGTCGGCGAG ACCGGGCACT GGTTCTGGGC GGGGACCGGG
CTGAAGAACG GGGAGCAGAT CCCGCGTCTG GTGGCCGGCG AGGCGGACAA GGTGTTCCCG
CATGTGAAGG GCGGGCCGAA GACCACGGTC CTGGCGACGT CGCCGTTCAC CGCCGAGGGT
CCGAAGAACA CGCCGGTCAA GGACACGCAG CAGACCGTGC TGAGCCAGTA CCCCTCCGGG
GCGTGGATGT TCAACGCCGG GACGTTCCAC TGGAACCACG GGCTGTCGAC GCCGGGGTTC
GTCGACGTGC GGATCCAGCG GGCCACGCGG AACCTGCTGG ATCGGATGAC CGGGAAGCGC
TCGGCCTAG
 
Protein sequence
MHVPSRRQSL LILGGLGLAA TAGGAYLLEN HGGGSGKPAA NPPKPQPQPQ ARGRAKSTYG 
TGDANEGQEG EPSNATGETV PSLALALADD GAWRPDATGY LAVDDEGHQI KGFASATSIN
VGESIDFHIS VRPAQSFTVK VYRIGRSAAG KGSELVFTSA KVTGKVQPAL KVVAPTRTVV
APWQLSYTLN VPNTWRGGLY VATLETADKY RSCIPFVVRE DGKPADLLVV LPFTTYQAYN
MYPVDKALGA SLYNAYQPDG REGGADICAT RVSFDRPYHQ DGLPRLFELD QAFAQWVEAQ
PYTISYASSI DLHAGRIDPA KYKALVFSGH DEYWTPQMRA VLQGALSRGV SAAFMAANNV
YWNIRLDASQ GGSQYRQVTC YKRRPDPAAT GSVAPTVLWR DLNQPEQQVL GSMYTAIITD
TQPQPLVVGE TGHWFWAGTG LKNGEQIPRL VAGEADKVFP HVKGGPKTTV LATSPFTAEG
PKNTPVKDTQ QTVLSQYPSG AWMFNAGTFH WNHGLSTPGF VDVRIQRATR NLLDRMTGKR
SA