Gene Caci_0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0250 
Symbol 
ID8331577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp280193 
End bp281374 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content67% 
IMG OID644953417 
Productimidazolonepropionase 
Protein accessionYP_003111044 
Protein GI256389480 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID[TIGR01224] imidazolonepropionase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.304312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGCA GCGTGACCAG TACTCTCCTC ACCGGCATTG CCGAGCTCAC TACTCACGCC 
GATTCCGGTG GCTTGGCCGA CTCGACCGTT GCCGATGCCG CCATGGTCGT TGTTGATGGG
CGGGTTGCGT GGACGGGTCC GGGGGCGGGG GCTCCGGATG CTGATGAGCG CGTGGAGCTT
GGGGGGCGGG CGGTGATTCC TGGGTTCGTT GACAGCCATG CTCATCTGGT GTTTGCCGGG
GATCGGGCGC AGGAGTTTGC TGCGCGGATG ACTGGGGCGC CGTACAGTGC CGGCGGGATT
CGTACGACTG TCGCTGCCAC GCGTGGTGCG TCGGATGATG TGCTGCGCAG TAATCTGCGG
CGGCTTGTCG GGGAGATGTT GCGGCAGGGG ACGACGACCG TTGAGTGCAA GTCGGGGTAT
GGGCTCACGG TTGAGGATGA GGCGCGGGCG TTGCGGCTGG CGCGTGAGCA GGTCGAGGCG
GTGACGTACC TCGGTGCGCA TGTTGTGCCG GCCGAGTACA AGGATCGGGC TGGGGAGTAC
GTCGATCTGG TCAAGGGTCC GATGCTAGAT GCCTGTGCGC CGTATGCCGA CTTCGCCGAT
GTGTTCTGCG AGCGCGGGGC GTTCGATGAG GAGCAGACGC GCGAGATTCT GACCGCTGCT
CGGGCCAAGG GGCTGGATCT GCGGTTGCAT GCCAACCAGC TCGGCAATGG GCCTGGCGTG
CAGCTCGCTG TCGAGTTCGG CGCGGCGTCG GCGGATCACT GCACGTTCCT GGACGACAAG
GACATCGACG CGTTGGCTGG ATCACAGACT ATTGCGACGC TGCTGCCGGG GGTGGAGTTC
TCGACGCGCT CGCCGTACCC GGACGCGCGC CGGCTGCTGG ATGCCGGGGC GACCGTCGCC
ATCGCCACTG ACTGCAACCC AGGGTCCTGC TACACGAATT CGATGCCGTT CTGCATCGCC
GTGGCGGTCA GGGACATGCA CATGTCGCCG GCCGAGGCGC TGTGGGCCGC GACAGTCGGT
GGGGCAAAGG CACTGCGCCG CGATGATGTC GGCCACCTGG GCGTCGGTGC CCGCGCGGAC
TTCGCTGTGC TGGACGCGCC GAGCTATCTC CACCTCGCCT ATCGGCCGGG CGTCCCGCTT
GTCCACAGGG TGTGGAAAAA CGGGACGCCG GTCGCCGGGT AG
 
Protein sequence
MGSSVTSTLL TGIAELTTHA DSGGLADSTV ADAAMVVVDG RVAWTGPGAG APDADERVEL 
GGRAVIPGFV DSHAHLVFAG DRAQEFAARM TGAPYSAGGI RTTVAATRGA SDDVLRSNLR
RLVGEMLRQG TTTVECKSGY GLTVEDEARA LRLAREQVEA VTYLGAHVVP AEYKDRAGEY
VDLVKGPMLD ACAPYADFAD VFCERGAFDE EQTREILTAA RAKGLDLRLH ANQLGNGPGV
QLAVEFGAAS ADHCTFLDDK DIDALAGSQT IATLLPGVEF STRSPYPDAR RLLDAGATVA
IATDCNPGSC YTNSMPFCIA VAVRDMHMSP AEALWAATVG GAKALRRDDV GHLGVGARAD
FAVLDAPSYL HLAYRPGVPL VHRVWKNGTP VAG