| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0218 |
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| Symbol | |
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| ID | 8331544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 237642 |
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| End bp | 240188 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644953386 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003111014 |
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| Protein GI | 256389450 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2247] Putative cell wall-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.904216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTTTCC TCGCCGCGAA CGCCCGCGCC GACACGGTCG CCGCGACAGT GTTCGTCGGG
TCGACGAGCG GTGCTCCGTG CAGTGACACC GCCGCCGCAG CAGGATCCGC GGCGACTCCG
TTCTGTGCCA TCCAGCCGGC GATCGACTCA CCCCTGACCG GACCGGGGAC GACGGTCCTC
GTCGCTGCCG GCGCCGCCTA CCTCGGGCAG GTGAATCTGG ACAAGTCGGG CACGTCCGCC
GATCCGATCG TCTTGCGCTC CGCGTCGCCG GCGCAGGGCA GTCGCGCTGT CATCAGGGGC
ACCGTTTCCG TGAATGGGGC GCACGATGTC ACCGTCGACG GGTTCGACAT CTACGCCGAC
ACCTTCGGGG TCAACATCGA GGCATCCTCG GACGTCGTCG TCACCCGCGA CCACATCGAA
GGTCCCCATG ACTCGAGTGT CGCGGACTCC GGCATCATGA TCGCGATGGC ATCGTCGGCG
GTCACGGTCA GCACCGACTT CGTCAGGGGT TTCGGTGGCG GAGGCCTGTT CGCGGACTCT
GTGTCCGGGC TGAACATCGT CGCCGACACC ATCACGCGCA ACACGACGCC GAGCGCCGGG
CTGGACTCGA TCGAGGTGAC CGGAACGTCC AGCGGAGTCG CTGTCGCCGA CGACATCATC
GACGCTGCGC CGTCCTTGCC GGCCGGGTCC GCCGTCGACT ACAACGTGAT CGACGCCGGC
GCCGTCGGCC CGCACGACAT CACCGGCGAC GGTCTGGCCG GGAGCACCGA CGGTGACATC
ACGCCGGGCG ACACCTCGCC GGCGATCGAC TCCGCTGAAG AGGCGGCTAC CGGCGAACTG
CCGACCGACA TGTTCGGGAA CGCGGCTGCC GACGATCCGC TGGTTCCCAA CGCCGGCACC
GGATCACGCG TCCGGGACCG CGGCGCCGTG GAGCGGACGC ACGGCGATAC GAGTTACGTC
CTCACCCTCA CCCCGGCATC CGGCGACGCC CCGCTCGCGG TTACCGCCAC CGTCACCGAG
CACGTCGGCT GGGCTCAGCA GCCGCGCGCG GCCTTCTACT CCTTCGGCTT CGGCGGGACC
GAGCAGCCGG CCACCGCCAA CCCGACAGCG CGGCACACTT ACACGACTCC GCTCTACGGC
GGCGACGTAT CCGTCACGAT CTACGACAGC GCCCATGAGG CCATCGGCTA TACGACAGCG
CTCGTCAACG TCGGCCAGCC GGTTCACGCC ACGCTCTCCG TCGCCGCGGC CTCCGGTCTG
AACGTCAACG CCGTCGGCAG CGTCCAAGGC GGCGTCGGCG ACTGGTCCAT CGACTTCGGC
GACGGATACT CGACAAACTT CTACAGCCAG ACGCAGGCCA CTGCGAACCA CTCCTACGCG
AAGCCTGGAA CCTACAAGGT CACCCTGACC GCGAACGGAA TCCTGCCCTC CAACGCCGCG
AAGCTCACCC AGCAGGTGAC GGTCACGGCG CCGCCCGCCC CGCCGCCGAT CGTGGACACG
GACCCGCTCG TCCACCGCAT CGCCGGCTCC GACCGCTACG CGACGTCGAT CGTCGCCTCC
CAGGTCCGGT GGAGCGCCGC GAACAGCGTC GACGGCGCCC CGGCGGAGGA TCAGGCCCAG
GCCGTCGTGC TCGCCCGAGG CGACGCGTTC CCCGACGCCC TCGCCGGCGT CCCGCTCGCC
GCGTACAAGC ACGGTCCGCT GCTTCTCACG GACCCGAAGA CCGTGAGCCA GGCGACCCTT
GAGGAGATCC GCCGCGTCCT GCCGGCCGGC GGAAACCATA CGATCTACAT CCTCGGCGGC
AAGACAGCCG TGTCGCCGTC CGTCGAGGCG GAGCTCCGCG GCCTCGGCTA CAACGTCGTC
CGCTACGGCG GCACAGACCG GTACGGCACC GCACTCCTGA TCGCCCACCT CGGCCTCGGG
GATCCCAGAC ACCTGATCAT CGCGATCGGC GGAGACTTCG CCGACGCCCT CGCCGCCGGA
CCCTTCGCAG CTGACAGCGC CGAAGTCGTC GACGGCAAAC CAGCCGCGAT CCTCCTGTCC
GGCAAGGCGA ACGGAAACGA CACCATCACC GACGCCGGCA CAGCCGCATA CATCGACGCC
AAGGTCCAGT CCAACGGCGG CCTCAGCCAC TGCACCGACC CCAACCTCAT CACCGCAGTA
GGCGGCCCAG CCCTCACCGC CTTCCTGAAC CAGGAACACA AGGCAACGAA ATACGCCTGC
GTCGACGGCA TAGTAGGCGC CGACCGCTAC GCAACCTCCA GCCAACTAGC CGGCCAATGG
ACCAACCCCG AACACCCCGG AGTAGCAGTC GGCACAACCT TCCCCGACGC ACTCAGCGGC
GGCGCCTACG AGGCCAGCCT CGGCCAACCC CTACTCCTCA CCAACCCAAC CTCGCTACCC
AGCTCAACAG CCACCGCACT AGCCTCGATG TACCCGCCAC ACGAAAACAC CCGCACCCGC
TCGGTCGTGA TCTTCGGCGG CACTTCAGCG GTGAGCAGCG CCGTGGAGAA CCAGATCATT
GCGAAGGTCC ACGGTCGCGC CCAATAG
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| Protein sequence | MPFLAANARA DTVAATVFVG STSGAPCSDT AAAAGSAATP FCAIQPAIDS PLTGPGTTVL
VAAGAAYLGQ VNLDKSGTSA DPIVLRSASP AQGSRAVIRG TVSVNGAHDV TVDGFDIYAD
TFGVNIEASS DVVVTRDHIE GPHDSSVADS GIMIAMASSA VTVSTDFVRG FGGGGLFADS
VSGLNIVADT ITRNTTPSAG LDSIEVTGTS SGVAVADDII DAAPSLPAGS AVDYNVIDAG
AVGPHDITGD GLAGSTDGDI TPGDTSPAID SAEEAATGEL PTDMFGNAAA DDPLVPNAGT
GSRVRDRGAV ERTHGDTSYV LTLTPASGDA PLAVTATVTE HVGWAQQPRA AFYSFGFGGT
EQPATANPTA RHTYTTPLYG GDVSVTIYDS AHEAIGYTTA LVNVGQPVHA TLSVAAASGL
NVNAVGSVQG GVGDWSIDFG DGYSTNFYSQ TQATANHSYA KPGTYKVTLT ANGILPSNAA
KLTQQVTVTA PPAPPPIVDT DPLVHRIAGS DRYATSIVAS QVRWSAANSV DGAPAEDQAQ
AVVLARGDAF PDALAGVPLA AYKHGPLLLT DPKTVSQATL EEIRRVLPAG GNHTIYILGG
KTAVSPSVEA ELRGLGYNVV RYGGTDRYGT ALLIAHLGLG DPRHLIIAIG GDFADALAAG
PFAADSAEVV DGKPAAILLS GKANGNDTIT DAGTAAYIDA KVQSNGGLSH CTDPNLITAV
GGPALTAFLN QEHKATKYAC VDGIVGADRY ATSSQLAGQW TNPEHPGVAV GTTFPDALSG
GAYEASLGQP LLLTNPTSLP SSTATALASM YPPHENTRTR SVVIFGGTSA VSSAVENQII
AKVHGRAQ
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