| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0173 |
|---|
| Symbol | |
|---|
| ID | 8331499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 185807 |
|---|
| End bp | 186595 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644953341 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_003110969 |
|---|
| Protein GI | 256389405 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG CGACCTTCTC TTCCCGCTCC TCCCGTCTGC TGCCCGAATT CCGGATGACC
GGCAACGGGT TCCGCACCCT GGTGCGCACC CAGGCCCGGC TGCTGTGGCG GGAACCGGCG
GTGGTGTTGT CGGGAATCGC CTTGCCGGTC CTGCTGATCA TCGTCTTCGG CTGCATCCCT
TCGTTCGGGA AGCCGGCGGC CTCGCTCGGC GGCAGGACGA CGATGGACGT CTACGTCCCG
ACCTTCGCGA TGCTCTCCTC GGTGCTGACC GCCCTCACCG CTCTGCCGGT GACCTTCGCG
GACCTGCGGG AGCGGGGCGT GCTGCGGCGT CTGGCGGTCT CGCCGGTCCC TGCCGCCGGG
CTGCTCGCGG CACAGGTGAC GGTGATCGCC ACGACCGCCG CGGTGACGGC GGCCTCGGTG
GTGCTGATCG GCGTGGCCGG GTTCGGCGCC TCGCTGCCGG CGCACCTGGC GCTGGTGCTG
GCGTCCTACA TCCTGGGGAC CACCGCGCTG CTGGCGATCG GGCTGCTGAT CGCGGCGCTC
GCGCCGTCGG CCGGGGTGGC GACCGGGTTC GGTGTGCCTA CGATGATCCT GAACTTCTTC
TTCGCGGGCG TCTACGTCCC GCTCCAGCAG CTGCCCTCGG TGCTGCGCAC GGCCAGCGGG
TTCGTGCCGT ACGGCGCGAT CGTGGACACC TGGTCCGGCA CCGGCGCGGC GTGGCAGCAT
CTGACGGTGC TCGCGGTGTA CACCGTCGTC GGCGCGCTGG CTGCGGCCCG CGTGTTCAAG
TGGGAATAG
|
|---|
| Protein sequence | MSTATFSSRS SRLLPEFRMT GNGFRTLVRT QARLLWREPA VVLSGIALPV LLIIVFGCIP
SFGKPAASLG GRTTMDVYVP TFAMLSSVLT ALTALPVTFA DLRERGVLRR LAVSPVPAAG
LLAAQVTVIA TTAAVTAASV VLIGVAGFGA SLPAHLALVL ASYILGTTAL LAIGLLIAAL
APSAGVATGF GVPTMILNFF FAGVYVPLQQ LPSVLRTASG FVPYGAIVDT WSGTGAAWQH
LTVLAVYTVV GALAAARVFK WE
|
|---|
| |