| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0115 |
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| Symbol | |
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| ID | 8331440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 118256 |
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| End bp | 119920 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644953282 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003110911 |
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| Protein GI | 256389347 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.434385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA CGAGCACAGC GGCCGCACCT CCGCCTGAGA ACGACACGGG GCGCCTCGAC
GGTGCCTCCC GTGCGCGCAT CTTCTCCGTC ATCGTGGTCG TCGTGCTCTT CGCCGAGGTC
GCGCCCTTGC AGTACACGAT GGTCTCGCCG GCGGCGCAGC TGATCGGGCG CAGCTTCCCC
GGCGTGGGCA GCAACATCGC GTGGATGACG ATCATCTTCG GGCTGGTCGG CGGGGCGGCG
ACGCCGATCC TGGGCAAGCT GTCCGACTTG TACGGCAAGC GGAACATGCT GCTGGCGGTC
GGGATCTCCT TCTTGATCGG GTCGCTGATC TGCGCCACCA CCAGCAACTG GACCATGTTC
CTGATCGGGC GGGCGTTCCA GGCGGTCGCC ATCGCGGCGG CCACCGTCGC CTACGGGCTG
ATCAGGGACC TGATCCCGCG CAAGTACGTG CCGCTGGCGA TCGGGCTGGT GTCCACCGGG
CTCGGGGTGT CCGGGGTCGG CGGGATCATG CTCTCCGGCG TGCTGACAGA CACCGCCGGC
TGGAGTTACA AGGCGCTGTT CTGGTTCCTG GTGATCTACA CGCTCGTCAC GCTGCCGCTG
CTGTTCCTGG TGTGCCCGGA GACCAAGTTC CGCGCCCGCC AGAAGCTGGA CCCGTTCGGC
GCCCTGCTGC TGGCCGGCGG CGTCGGGTTC GCGCTGCTGT ACGTGTCCAA CGGCGCGAAC
GTCGGGTGGT CCGACCCGCT CTACCTGGGC TACCTGCTCC TCGGCGTGGT GCTCATGGCG
GGGTTCGTCC TCCTGGAACG GAGGGTCAGC CAACCGATCA TCGACCTGCG GCTGCTGTTC
TCGCCGAAGG TCTCGGTGGT GCTGTTCATC GCCTTCTTCG CCGCGATCGT GGTCGGCATC
CAGGCTTTTT CCATTCCCTA CATGGTGTCC ACGCCAAGTC ACGACGGCCT CATCGCGATG
ACCCAGCAGG GCGCCGCGGC GCGCTTCAAG GGACTGGTGC AGCCGAACCA GATCCCGGTG
AAGGTGCTCG GCGACATCGG GTACGGGCTC GGGTTCACGT TGTTGGGCCT GGCGTTCCAC
GTCCAGGTGT GGGGCTCGTC GGTGTCGATG TTCTCCGGGG CGGCGTCCGG GCAGTTGTCA
GGCAAGATCG GCGCACGTAA GCCGTTGCTG ATCGGGATGC TCACGTTCGC CGCCACCAGC
GGTATATACG CCGCCGCGCA TCACGGCGCA CTGACGCTGG CACTGGTCGG CATCGTCTTC
GGTGTCGGAT TCGGCGCGTA CTACGCGACG ACACCGAACC TGCTCGTGGA AGCCTCTCCA
CCGGAGCAAC AGGGAATCAC AGCGGGCATG CTCGGAGTGT CCAACTCCAT AGGCACTGCT
GTGGGAACCG CTATAGCGGC GGCCTTCCAG GCGGCGCACC CTGTGAGGCT GATTGTGGCC
GGACAGACCG TTCTCGCAGG TACTCCCGAT CCGAAGACCG GAGTAACGGA GCGCGCGGGA
GTCTTCACCG ACACTGCCTA TACGCAGATC TTCATAGCGT GTGCGATAGC CGGCTTCATC
GCGCTGGCAG CTACGTTCTT CATGCGGTCT GGACGAACAG CTTCTACAGG TGGTCTCGGC
TACCTGACCG ACCCGGCGCC TGCGAAAGAG ACCGCGCCTG CTTAA
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| Protein sequence | MTDTSTAAAP PPENDTGRLD GASRARIFSV IVVVVLFAEV APLQYTMVSP AAQLIGRSFP
GVGSNIAWMT IIFGLVGGAA TPILGKLSDL YGKRNMLLAV GISFLIGSLI CATTSNWTMF
LIGRAFQAVA IAAATVAYGL IRDLIPRKYV PLAIGLVSTG LGVSGVGGIM LSGVLTDTAG
WSYKALFWFL VIYTLVTLPL LFLVCPETKF RARQKLDPFG ALLLAGGVGF ALLYVSNGAN
VGWSDPLYLG YLLLGVVLMA GFVLLERRVS QPIIDLRLLF SPKVSVVLFI AFFAAIVVGI
QAFSIPYMVS TPSHDGLIAM TQQGAAARFK GLVQPNQIPV KVLGDIGYGL GFTLLGLAFH
VQVWGSSVSM FSGAASGQLS GKIGARKPLL IGMLTFAATS GIYAAAHHGA LTLALVGIVF
GVGFGAYYAT TPNLLVEASP PEQQGITAGM LGVSNSIGTA VGTAIAAAFQ AAHPVRLIVA
GQTVLAGTPD PKTGVTERAG VFTDTAYTQI FIACAIAGFI ALAATFFMRS GRTASTGGLG
YLTDPAPAKE TAPA
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