| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0065 |
|---|
| Symbol | |
|---|
| ID | 8331390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 65385 |
|---|
| End bp | 66143 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644953232 |
|---|
| Product | transcriptional regulator, MerR family |
|---|
| Protein accession | YP_003110861 |
|---|
| Protein GI | 256389297 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGGT CGATCGCGCA GGTGGCGCGG ATGTCCGGGG TCACCGCCCG AACTCTGCGC
CACTACGACG ACATCGGGCT TCTCAAGCCC GACCACGTCG GCGCCAACGG CTACCGCTAC
TACGAGGAGG CGCAGCTGCT GCGCCTGCAG CAGATCCTCG TCCTGCGCGA GCTGGGACTC
GGCCTGTCCG AGATCGCCGA GGCGATCGAT TCCGAACCGG ACACGATCGT GGCCCTGCGC
CGGCAGTACG GCCGGCTGCT CGTCGAGCGC GACCGGCTCT CGCGGGTCGC CGAGACCGTG
CGGCGGACCA TCGCCGAGCT GGAAGGGAAG CCACAGATGT CCGTGCACAT CAACCGGCCG
GAGAACCTCT TCGAGGGGTT CGAGGAGTCG CAGTACGAGG ACGAGGCGCG CGAGCGCTGG
CCCGAGGAGT TCGAGCAGGC CCAGGCCAAG CGCGCCACCA TGACCGAGGA GGACCTCGAG
CGCTGGCAGC GCGAGGCGAC CGCCGCGATG ATCCGGATGG CGGAGTTCAT GGCCGCCGGG
ACACCGGTCG ACGACCCGGC GGTGCAGGAC GAGGTCCACC AGCACTACCA GGGCATCTGC
ATCTGGTGGA CGCCGAACCG CAGCGCGTAC AAGTGCGTCG GCCAGATGTA CGTCGACGAC
GAACGCTTCA AGGCGAACTA TCTGAAGATC GCCGAAGGGC TCGCGGAGTA CCAGGCGGCT
GCGATGGCCG CCTATGCGGA CGCGCGCCTG ACCGACTAG
|
|---|
| Protein sequence | MSWSIAQVAR MSGVTARTLR HYDDIGLLKP DHVGANGYRY YEEAQLLRLQ QILVLRELGL
GLSEIAEAID SEPDTIVALR RQYGRLLVER DRLSRVAETV RRTIAELEGK PQMSVHINRP
ENLFEGFEES QYEDEARERW PEEFEQAQAK RATMTEEDLE RWQREATAAM IRMAEFMAAG
TPVDDPAVQD EVHQHYQGIC IWWTPNRSAY KCVGQMYVDD ERFKANYLKI AEGLAEYQAA
AMAAYADARL TD
|
|---|
| |