| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_2032 |
|---|
| Symbol | |
|---|
| ID | 8324135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 2152455 |
|---|
| End bp | 2153981 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644953159 |
|---|
| Product | transposase IS4 family protein |
|---|
| Protein accession | YP_003110606 |
|---|
| Protein GI | 256372782 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.214067 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGGCA CCGAATCAGA CCAGGCACAC CTCACCGCGA CGGAGGCCTT CTGCTCCTCG
CTCATCGAGC CAGGGTCCAT CTACGCCTTC CTCGCCGAGC ACCGCAGGGA GCTCTTCCCC
GACGAGCGCT TCCGCCACCT CTATCCCTCC ACGACCGGCA GACCCTCCAT CCCCGCCTCG
AGGGTGCTCG CGGTCATGGT GCTCCAGGTG CTCGAGGGGC TCTCGGACAC CGAGGCGACA
GAGCAGGTCC GCTACAACCT GCGCTGGAAG TACGCCCTCG GTCTCGACCT CGAGGACCCA
GGTTTTCACC CCACGGTGCT CACCTACTGG CGCAGGCGCA TCGCCACCTC CGAGACCCCA
AGACTCATCA CCGAGCTCGT GGCCGAGGTG ATCGGTGCCA CGGGGGTGCT CAAGGGCACG
ACGAAGCGCG TCGTCGACTC CACCGTGCTC GCCGATGCGG TCGCGACCCA AGACACCATG
ACCCAACTCG TCGCTCAGAT CAACCGGGTA CGCAGGCTGA TCCCCGAGCT CCGCGAAGTT
CCTCTGTCAC CAGCGATCGA CTACACCCGT CCAAAGCCTG CCATCGACTA CCGAGACGAA
GAAGCAGTGG TGCGCACGGT GAGCGCCCTC GTCGCCGATG CCACCGCCCA CCTCGCCGAG
GCCGAGAAGC TCGCGTCTCT CACCGAGCCC CAGCGCGAGG CCCTGGGCCT CCTTGGGCTC
GTGGCGGGCC AGGACGTCGA GTGCACAGAT GCCACCGCAG GCCGCTGGCG CATCGCGAGG
CGAGTGGCCC GCGACAGGGT CATCTCCACC GTGGACCCCG ACGCTCGCCA TGTGCACAAG
TCCCGTGCCC GTGCCATCGA TGGCTACAAG GGCCACGTGG CCGTCGAGCC AGACAGCGGC
ATCGTCACCG CCTCGACCAT CACGACGGGT AGCGTGCCTG ATGCACAGGT CGTGCCCGAG
CTCCTTGGTG ACGAGGACGG CCCACGCACG GTCTATGGCG ACAGCGCCTA CGCCACGAGC
GAGGTCTTCA ACGAGCTTGC CGCTCATGGC CACGACGAGG TGATCAAGCC TCGGCCCCTT
TCTATGGCGG TCCCTGGTGG CTTCACGATC GACGACTTCG TCGTCGAGGA GGGATGGGTT
AGCTGTCCTG CGGGGCACCG AGTCCCCATT TCCGCGAAGG GCCGTGCCTC CTTCGCCAAG
CACTGCGATG GCTGTCCGCT CCGGGAGCGC TGCACACGAT CGAAGCGCGG ACGGGTCCTC
ACCTTCACCC CTGCCACCTG GCACGGCATC AGCCAGCGGG CGCACTTTGG GGACCCGGCT
GTCCGTCTCG ACTACCAGCG CACCCGACCG AACGTCGAGC GGATCCACGC ACAGCTCAAG
CGCAAGCTCT CCGGGGCGAG GCTGCGCTAC CGGGGACTCG TGCGCAACCG CCTGCACTTC
GAGCTGCTCT GTGCGACCTG GAACCTGAAG GTGCTGCTAC GCCTGGGGCT CACCCGAGTG
GGTGGTGGCT GGGTGCTTGC CACCTGA
|
|---|
| Protein sequence | MLGTESDQAH LTATEAFCSS LIEPGSIYAF LAEHRRELFP DERFRHLYPS TTGRPSIPAS
RVLAVMVLQV LEGLSDTEAT EQVRYNLRWK YALGLDLEDP GFHPTVLTYW RRRIATSETP
RLITELVAEV IGATGVLKGT TKRVVDSTVL ADAVATQDTM TQLVAQINRV RRLIPELREV
PLSPAIDYTR PKPAIDYRDE EAVVRTVSAL VADATAHLAE AEKLASLTEP QREALGLLGL
VAGQDVECTD ATAGRWRIAR RVARDRVIST VDPDARHVHK SRARAIDGYK GHVAVEPDSG
IVTASTITTG SVPDAQVVPE LLGDEDGPRT VYGDSAYATS EVFNELAAHG HDEVIKPRPL
SMAVPGGFTI DDFVVEEGWV SCPAGHRVPI SAKGRASFAK HCDGCPLRER CTRSKRGRVL
TFTPATWHGI SQRAHFGDPA VRLDYQRTRP NVERIHAQLK RKLSGARLRY RGLVRNRLHF
ELLCATWNLK VLLRLGLTRV GGGWVLAT
|
|---|
| |