| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_2022 |
|---|
| Symbol | |
|---|
| ID | 8324125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 2138539 |
|---|
| End bp | 2139342 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644953149 |
|---|
| Product | citrate synthase |
|---|
| Protein accession | YP_003110596 |
|---|
| Protein GI | 256372772 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.275146 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCACGC CCGAGTTCCC GACCAGTATT GGCGTATCCA CGCCCGAGGC GATCACCCTG
CTCGGGGCTG ACCTCGCGGG CGAGCTCATG GGTTCGGTGA GCTTCGGAGA GCTGGCCTTC
TGGCTCGTGA CCGGCAGGCG ACCCAGCGCT GGCGAGGTCC GCGTGTTCGA GGCGTGCTTG
GTCTCGCTCG CTGACCACGG CTTCACCCCC ACCGCGATCG CAGCTCGGTT GACGCTCCTG
AGCGCGCCGG AGTCGATCCA GGGGGCGCTT GCTGCGGGAA TCCTCGGTGG GGGCTCCAGG
TTCCTCGGAG TCACCGAGGA TACCGGTCGC TTTCTCGCCG ACGCATTGGC CCGTGCCGAG
CAGACACCGC AGACCGCGTC GGACTTCGAT GCGATCGCTC GGGACGCAGT CGCGAGCGCC
CACCGTGATG GGCGCTACGT CCCGGGGTTG GGCCACCCGG TTCACAAGGA GCGCGACCCG
CGCACGGGCG TGCTCATGGA ACTGGCGCGA CGCGAGGGCG CCGCGGGTCC GCACGTGGCA
CTCTTCGAGG CGATCGGACG AGTGCACGCC GACATACTCG GTCGCCGGCT GCCGCTGAAC
GGCGCTGGTG CAGCCGGGGC CGTTCTCTGG GACCTTGGCA TCGAGGGAGA ACTCGCGCGA
GGCGTGGTCC TGCTCGCGCG TACCGCCGGG ATCCTTGGCC ATCTTGCCGA GGAGCGTCGG
CGGCCCATCG CGATGGATGT GTACCTCACG GTGGATCGAG GGGCGCGCTA CGTCGCCCCA
GGCGCAAGCG ATCCGACTGC CTAG
|
|---|
| Protein sequence | MSTPEFPTSI GVSTPEAITL LGADLAGELM GSVSFGELAF WLVTGRRPSA GEVRVFEACL
VSLADHGFTP TAIAARLTLL SAPESIQGAL AAGILGGGSR FLGVTEDTGR FLADALARAE
QTPQTASDFD AIARDAVASA HRDGRYVPGL GHPVHKERDP RTGVLMELAR REGAAGPHVA
LFEAIGRVHA DILGRRLPLN GAGAAGAVLW DLGIEGELAR GVVLLARTAG ILGHLAEERR
RPIAMDVYLT VDRGARYVAP GASDPTA
|
|---|
| |