| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1984 |
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| Symbol | |
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| ID | 8324084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 2092133 |
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| End bp | 2093584 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644953110 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_003110560 |
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| Protein GI | 256372736 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02924] isocitrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.569508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACGAG GAAGCGACCA GCCGACCCCC ATCACCGTCG CCTACGGCGA CGGTATCGGA
CCTGAGATCA TGAGCGCGGT GCTGGAGGTG CTCGAGAAGG CCGGCGCCCG GCTCGCGATC
GAGACCATCG AGGTCGGCGA GGCGCTCTGG CGTCGGGGGA TCACGTCGGG GATCGAGCCG
TCGGCCTGGG AGTCGCTGCG GCGTACCAAG GTGTTCCTGA AGGCCCCGAT CACCACCCCG
CGCGGCGGCG GCATGAAGAG CCTGAACGTC ACGATTCGCA AGGCACTCGG CCTGTTCGCC
AACGTCCGCC CCTGCCCGAC GTACGCCCCG TTCATCCAGA CTGCGCACCC GGGCATGGAT
GTGGTCGTCA TCCGCGAGAA CGAGGAAGAT CTCTACGGCG GCATCGAGCA TCGCCAGACC
GAGGACGTGG TGCAGTGCCT GAAGCTCATC AGCCGACCGG GTACCGAGCG ACTCGTGCGC
TACGCCTTCG CCTATGCCGA GCGCCACGGT CGTCACAAGG TGACCTGCCT CGTCAAGGAC
AACATCATGA AGCTCACCGA CGGCCTGTTC CGTCAGGTGT TCGAGGAGGT GGCGAGGGAG
TATCCGAACC TCGAGACGGA GACCTTGATC GTCGACATCG GCACCGCCCG CCTCGCGGCA
CGCCCCGAGG ACTTCGACGT CGTCGTCACG CCGAACCTCT ACGGCGACAT CGTCTCCGAC
GTCGTCGCCG AGGTCGCGGG CTCCGTGGGG CTCGGTGCGA GCGCCAACGT CGGTGCCGAG
GTCGCCATGT TCGAAGCCAT CCACGGCTCG GCGCCCGAGA TCGCCGGCCG GGGGATCGCC
AACCCCTCGG GACTCCTGTT GGCTGCGGTG CTCATGCTCG TGCACGTCGG TCAGGGGGAC
GTCGCCGAGC GCGTCCACAA CGCATGGCTC GCCACCATCG AGGACGGCAT CCACACCGCC
GACGTCTACC ACCCCGAGCG CTCTCGGGCC AAGGTCTCGA CGGAGGGGTT CGCGGCGGCG
GTCATCGAGC GGCTCGGGGC CTCGCCTGCG ACGCTGCCCG TGGTGCACTA CCCCGCGAGC
GCCGAGGCCA TCCGCGTCGA ACCCAGCCCA CGGCATGCGT CGGTGAAGGT GCAGGTCGGT
CTCGATGTCT TCGTGGAGTG GACCGGCACC GTCGACGAGC TCGCCGAGCG GTTGTCGGCG
GCCGCGCCGG TCGGGATTCG CCTCGACATG ATCACGAACC GCGGCCAGAA GGTCTGGCCC
GACGGGTTGC CGGAGACCTT CTGCGTCGAC CATTGGCGGT GCCGGTTCGT GACCGACGCC
GGTGCGATGG CGCCCGCCGA GGGCGTCGCG CTCCTCGGCG CGCTCGCCGA AGCCGGCCTC
GCGTTCGTCA AGGTCGAAGG GCTCTTCACC TTCGACGGCG TACCCGGCTT CTCGATGGGC
CAGGGCCAGT AG
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| Protein sequence | MARGSDQPTP ITVAYGDGIG PEIMSAVLEV LEKAGARLAI ETIEVGEALW RRGITSGIEP
SAWESLRRTK VFLKAPITTP RGGGMKSLNV TIRKALGLFA NVRPCPTYAP FIQTAHPGMD
VVVIRENEED LYGGIEHRQT EDVVQCLKLI SRPGTERLVR YAFAYAERHG RHKVTCLVKD
NIMKLTDGLF RQVFEEVARE YPNLETETLI VDIGTARLAA RPEDFDVVVT PNLYGDIVSD
VVAEVAGSVG LGASANVGAE VAMFEAIHGS APEIAGRGIA NPSGLLLAAV LMLVHVGQGD
VAERVHNAWL ATIEDGIHTA DVYHPERSRA KVSTEGFAAA VIERLGASPA TLPVVHYPAS
AEAIRVEPSP RHASVKVQVG LDVFVEWTGT VDELAERLSA AAPVGIRLDM ITNRGQKVWP
DGLPETFCVD HWRCRFVTDA GAMAPAEGVA LLGALAEAGL AFVKVEGLFT FDGVPGFSMG
QGQ
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