| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1982 |
|---|
| Symbol | |
|---|
| ID | 8324082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 2089419 |
|---|
| End bp | 2090699 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644953108 |
|---|
| Product | putative signal transduction histidine kinase |
|---|
| Protein accession | YP_003110558 |
|---|
| Protein GI | 256372734 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGCA AATCGTCGTC GAGGGTCGAT ACCACGGCCG ATCGCATCCC GATCGGGGTC
GCCGTCGGAT GCTACGATGC GTCCATGGCC AGCGAGCTGG GCGGCCGTGC CGGAGGCACC
GGACGCAGGG TGCGACTCGG GTGGGAGGCG CTCGGCACCG TCACGATGGC GGGAACGCTC
TTCGTGATCG TGCTCGATCC GATCGGCTCG GCCGTGCGTG CCGTGTCGGT CGGCTTCGTC
CTCGCACTCA TGGTGGCGGT GTGGCTCGCG CTCGGCAGGG TCGGCTTCGA GCGGCCTGGG
CTCGCCCGCT GGCTGCTCGT GGGACTCGAG GGCACCTTGC TGCTGGTGGC GGTGGCCCTC
GATGCGAACG CGGCCTACCT CTTGCTCGCT TGGAGCTTCC TCGCCTACGT GCTGCTGGCG
GCCTCGGTGT CGGTCCCGGT CGTCATGGGG GTCGCCGCTC TCGTCGGCCT CGAGACGCAC
CTGCTCCCTC GCCCCCCTGT TCCCTGGGCC ACCATCGTGT CCTGGTACGT CCCCGACATC
GCCGCGGGCA CCATGCTCGC GGTGTTCCTC GAGCGCACGA GGCGCCACGA GGAACTCCTG
CGCCACACCA TCGACGAGCT GCGCGCTGCC CAGACCACCA TGCGCGAGCT CGCCTATCGC
ATGGGAGAGC TGCACGAACG CGAGCGACTC GCCGCGCGCA TCCACGAGAC CGTGGCCCAA
CACCTCGTGG GCATCCTCCT CTTGGTGCGT GGTGAGGCGC CCACCGAAGG GGCACGGCTC
ATCGAGGAGG CCTCGCTCGC GGGTCTCGAG GCGACTCGAT CGTTGATCCG CGAGCTGCGA
CGGCGCGAGG AGTCGCCCGA AGCGCTTGCC GACGTGGTCT TGGTGGAGGC GGCGCGCCTT
CGCGCGGCGG GTCTCGAGGT CGAGGTGGTG GGGGACCTCG AGGGGCTCGA GTTGCCGCCG
ATGGTACTGG ACCTCGCCGC ACGGTTGCTC GCGGAGGGCT CGACCAACGT CCTTCGCCAC
GCGATCGGTG CGACCCGCGT CCGCCTCGAG GCCCGACTCG AGGGAGCGCA GCTCGTGCTC
GGGGTGGTCG ACGACGGCGC AGCTCCGGCC GACCCGCGCC AGCTCGAGGG GCACCTCGGC
CTCGCGCTGC TCGCCGAACG TGTCGAGCGT CTCGGGGGTC TGTTCGAGGC CCACCCGAGA
GAGCACGGTG GTTTCGAGCT CGCCGCCCGT CTGCCGTATC GGATGGCCCG AGCCATCGAG
GAGCCTGCGT GGACCGCGTG A
|
|---|
| Protein sequence | MRRKSSSRVD TTADRIPIGV AVGCYDASMA SELGGRAGGT GRRVRLGWEA LGTVTMAGTL
FVIVLDPIGS AVRAVSVGFV LALMVAVWLA LGRVGFERPG LARWLLVGLE GTLLLVAVAL
DANAAYLLLA WSFLAYVLLA ASVSVPVVMG VAALVGLETH LLPRPPVPWA TIVSWYVPDI
AAGTMLAVFL ERTRRHEELL RHTIDELRAA QTTMRELAYR MGELHERERL AARIHETVAQ
HLVGILLLVR GEAPTEGARL IEEASLAGLE ATRSLIRELR RREESPEALA DVVLVEAARL
RAAGLEVEVV GDLEGLELPP MVLDLAARLL AEGSTNVLRH AIGATRVRLE ARLEGAQLVL
GVVDDGAAPA DPRQLEGHLG LALLAERVER LGGLFEAHPR EHGGFELAAR LPYRMARAIE
EPAWTA
|
|---|
| |