Gene Afer_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1952 
Symbol 
ID8324052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp2047971 
End bp2050175 
Gene Length2205 bp 
Protein Length734 aa 
Translation table11 
GC content71% 
IMG OID644953079 
Productphosphoribosylformylglycinamidine synthase II 
Protein accessionYP_003110529 
Protein GI256372705 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 
TIGRFAM ID[TIGR01736] phosphoribosylformylglycinamidine synthase II 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAGC CGCGCCACCG ATCCCTCGGG CTGACCGACG ACGAGTACGA GAGCATTCAC 
ACGTTGCTCA GGCGCGAGCC GAACGATACC GAGCTCGCGA TGTTCTCCAT CATGTGGTCG
GAGCACGCGT CCTACAAGTC CTCACGGGCA CTGCTCGGCC GACTCCCGTC ACGTGGTTCG
CGTGTCATCA TGGGCCCTGG CGAGAACGCC GGCGTCGTCG CGCTGACGGA CTCGGTGGCG
GTCGCGATCC GCATGGAGAG CCACAACCAT CCGAGTGCGA TCGAACCACA CCAGGGTGCT
GCAACCGGGG TCGGCGGCAT CCTCCGCGAC ATCTTCACCG TCGGAGCACG ACCCATCGCG
CTGCTCGATT CGCTGTGGAT GGGGCCCCAG GACGACGCGA GGAGCCGCTG GATCACCGAC
GGAGTCGTCG GCGGCATCTC TGCTTACGGC AACGCGGTCG GGGTGCCGAC GGTCGGGGGC
GAGCTACGGG TCGATGCGTG CTACGGCGCC AATCCCCTCG TCAACGTCGT CGCGGTGGGT
GTCGCGCCCA CCGAGGCGCT CGTGCGTGCT CGCGCCGAGG GTATCGGCAA CTACGTCGTC
CTCCTCGGCG CCCCGACCGG ACGAGACGGC ATCGGCGGGG TCTCCGTGCT GGCCTCTGCC
GGCTTCGATG CCACCGCGGA GCAGAAGCGC CCGAGCGTGC AGGTCGGCGA TCCGTTCGAG
GAGAAGAAGC TGATCGAGGC GTGCCTCGCG CTCATGCGCG CCGGCCTCGT CACCGGCGTC
CAGGACCTCG GCGGCGCGGG ACTGACGTGC GCGACCTCGG AGACGGCGGC CGCAGCGGGC
GTCGGGATGG ACATCTTCCT CGACGCCGTG CCACGTCGTG AGCCCGGGAT GACGCCGATG
GAGGTCCTGT GCTCGGAGTC GCAAGAGCGC ATGCTCGCCA TCGTCGAGCC CGGGCTCCTC
GACGAGGTCA TCGCGACCTG CCGACGCTTC GAGGTGACCG CGTCGGTCAT CGGGGTGGTG
CGCCCACCCG ATGCGGAGGG CCCGTACGCC GGTGAAGGAG TTCTGCGAGC CTTCGAGAGC
GACGGGGGAC CGCTCGCCGC CGTCATCCCG GCGCGGCTGC TCGCCCACGA CGGGCCGCGC
TATCGACGCC CCATGGCGCC GCCGGCCGAC CTCACCGAGC GACGCGCACA GGTCGTGACC
CTCGATGCGC CGGGAGCGAC GCTCCTCGCC GAGGTCGTCA ACGACCCGAT CGACCCCGCC
GGGGTGTGGC GACGCTACGA CCACATGCTG TTTCGCACGA GCCTGGTCGA ACCAGGCGCC
GACGCGGCAC TCCTGCGTGT GCGCACGCCC GAGGTCGGCG ACACCGGACG CGCCATCGCC
ATCACCGTCG ATGGCAACAA CCGCTGGACC CGTGTCGACC CGCGTCATGG GGCTACGTGG
CTGGTCGCCG AAGGCGTCGC GAACCTCGCG TGCGTGGGGG CAACGCCCCT GGCTCTCGTC
GACTGCTTGA ACTTCGGCAA CCCCGAGCAC CCCACGGTGA TGTGGCAGCT CGCCGAGAGC
ATCGACGGCA TCGCCGAGGC AGCCCGAGCA CTGGGGGTCC CCGTCGTCGG TGGCAACGTC
AGTCTCTACA ACGAGGCAGA CGGGATCGAC ATCGACCCGA CCCCCATCGT GTCGCTGCTC
GGCGAGCGCG CCACGCCGAC CGCGCCGGTA CCCGCTCCGG AGCGCGCCCA CGGCAGCCTC
GTCGTCCTCG CGCCACGAGG GGCAGAACCC CAGCTCGCGG GCTCGCGAGC GGCGGCCGTG
GCGGGTGTCG ATGGCGGCAC CCTGGCGCCG CTCGACTGGG AAGCGCACCG TCGTCTGTGC
GACGCGGTGG CGGACCTCGT CGTCGGGGAC GAGGTGAGCG CGGCAACCAA CCTGTCCGCC
GGCGGGCTCG CGCGATCAGC CGCCAGGTTC GCCCTTCGCA GTCGGCAGGA GGCTCGGCTC
GAGACCACGG ACACGCTCGC GCTCGTCGGC GAGCACCCGT CGCGGGTCCT CGTCGCCACC
GACGACCCGG AGAGGCTCGT GGCCTGGGCG TCGGCGAAGG ACCTCGACGC GACCGTCGTC
GGCTCGCTGG CTCCGTCGGG CGAGCCAGCC CTCGTGGTCG GCGCGCACCG GATCGTGCTC
GGTCGTACCC AGGACGTGCC GGCGCTCGTG CCGACCGACG CCTAA
 
Protein sequence
MDEPRHRSLG LTDDEYESIH TLLRREPNDT ELAMFSIMWS EHASYKSSRA LLGRLPSRGS 
RVIMGPGENA GVVALTDSVA VAIRMESHNH PSAIEPHQGA ATGVGGILRD IFTVGARPIA
LLDSLWMGPQ DDARSRWITD GVVGGISAYG NAVGVPTVGG ELRVDACYGA NPLVNVVAVG
VAPTEALVRA RAEGIGNYVV LLGAPTGRDG IGGVSVLASA GFDATAEQKR PSVQVGDPFE
EKKLIEACLA LMRAGLVTGV QDLGGAGLTC ATSETAAAAG VGMDIFLDAV PRREPGMTPM
EVLCSESQER MLAIVEPGLL DEVIATCRRF EVTASVIGVV RPPDAEGPYA GEGVLRAFES
DGGPLAAVIP ARLLAHDGPR YRRPMAPPAD LTERRAQVVT LDAPGATLLA EVVNDPIDPA
GVWRRYDHML FRTSLVEPGA DAALLRVRTP EVGDTGRAIA ITVDGNNRWT RVDPRHGATW
LVAEGVANLA CVGATPLALV DCLNFGNPEH PTVMWQLAES IDGIAEAARA LGVPVVGGNV
SLYNEADGID IDPTPIVSLL GERATPTAPV PAPERAHGSL VVLAPRGAEP QLAGSRAAAV
AGVDGGTLAP LDWEAHRRLC DAVADLVVGD EVSAATNLSA GGLARSAARF ALRSRQEARL
ETTDTLALVG EHPSRVLVAT DDPERLVAWA SAKDLDATVV GSLAPSGEPA LVVGAHRIVL
GRTQDVPALV PTDA