Gene Afer_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1923 
Symbol 
ID8324020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp2011277 
End bp2011939 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID644953047 
ProductTrkA-N domain protein 
Protein accessionYP_003110500 
Protein GI256372676 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGTCGG TGCACGTCAT CGTCGTCGGG TGCGGTCGTG TGGGTGCAGA GCTCACCCGT 
CGACTGAGCG CTGAAGGACA CTCCGTCACC GTGATCGACC GCAACCCAGA CGCCTTTCGA 
CGCCTCGGGT CGGCACGAGC GACGACCATC GTCGGGTCAG GGTTCGATCG AGACGTTCTC 
GAGGCCGCCG GCATCGGCGA GGCTGCTGCC TTGGCAGCGG TCACGAGCGG TGACAACTCG 
AACATCCTGG CGGCTCGGAT CGCCAGAGAC GTCTTCGAGG TGCCCAACGT CGTCGCACGC 
ATCTACGACC CCCGTCGAGC GGTCGTCTAC GAGCGCCTCG GCATCCAGAC CGTCGCGACC 
GTGACCTGGA CGACGGATCA GGCCCTCGCC CGCCTCTTCC CGCTGCGCAT CGAGCGTCCG 
TGGATGGACT CATCCGGGGA GCTCACGGTG GCGGAGATCA CACTGCCCCC CAGCCGGATC 
GGCAAACCCA TCGGCGCGCT CGAACGAGAG GGCGAGCTCC GTGTGGTCGC CGTCGTCCGA 
CCCGGCGGAG CCCGCCTGGC CACGGCAGGG CTCATCGGTC AAGAGGGAGA CCGCATCGTC 
GTCGCCGCGA GCCAACGCGC CCTGGCCGAA CTCGGCGCCT GGTCCAACGA AGTGGGGAGC 
TAG
 
Protein sequence
MESVHVIVVG CGRVGAELTR RLSAEGHSVT VIDRNPDAFR RLGSARATTI VGSGFDRDVL 
EAAGIGEAAA LAAVTSGDNS NILAARIARD VFEVPNVVAR IYDPRRAVVY ERLGIQTVAT 
VTWTTDQALA RLFPLRIERP WMDSSGELTV AEITLPPSRI GKPIGALERE GELRVVAVVR 
PGGARLATAG LIGQEGDRIV VAASQRALAE LGAWSNEVGS