Gene Afer_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1920 
Symbol 
ID8324017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp2005603 
End bp2006187 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content71% 
IMG OID644953044 
Productthymidylate kinase 
Protein accessionYP_003110497 
Protein GI256372673 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCCTCG ACGGACCCGA CAAGGTCGGC AAGTCGACGC AGGTCCACCT CGCGGTCGCG 
GCCGTGCGTG CCCGCGGTGT CGACGTGGTC ACGGCGAGAG ATCCAGGTGG CGACCCCGCT 
GCCGAGGCGC TCCGCGAGGT GGTCAAGACG CGGTCGCTCG CACCATGGGC CGAGCTGCTC 
ACGTTCGCTG CCGCCCGTGC ACAGCTCGTC GCAACGGTGG TGCGCCCCGC CGTCGAGGCG 
GGCACGCACG TGATCCTCGA TCGCTACTTC CCTTCGACCA TCGTCTACCA GGGCCCGAAG 
GTGGGAGAGG ATGCGATCTG GGCCCTCGAG GCGTTGACCG GCGATCCGGT CGCCGATCTC 
GTCCTCGTCC TCGATCGTGC CGAGCCGCTC GGCCTCGACG CCGGCGACCG GTTCGAGGCG 
GGTGGCCGCT CCGCGTGGGA GCAGATCCGG GCGCGCTACG CCGATCGTGC GCGATCGTGG 
GGATGGCGGC TCGTCGACGC GAACGGCTCG CGAGACGCGG TAGCGGCTCG GGTGCAGGCG 
ATGATCATGG CGGAGCTCGG GCTCGATGAC GACGCGCGTC GCTGA
 
Protein sequence
MVLDGPDKVG KSTQVHLAVA AVRARGVDVV TARDPGGDPA AEALREVVKT RSLAPWAELL 
TFAAARAQLV ATVVRPAVEA GTHVILDRYF PSTIVYQGPK VGEDAIWALE ALTGDPVADL 
VLVLDRAEPL GLDAGDRFEA GGRSAWEQIR ARYADRARSW GWRLVDANGS RDAVAARVQA 
MIMAELGLDD DARR