| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1915 |
|---|
| Symbol | |
|---|
| ID | 8324011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 2002506 |
|---|
| End bp | 2003483 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644953039 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003110493 |
|---|
| Protein GI | 256372669 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5282] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03624] putative hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAGCC CCGTGTCGCA CCAGGTGGCG ACGCTGTCGA TCCGAGCGCT CGTCCCGGAC
ACAGCGCCGC CGCCTCTCGA TCTGATTGGC CTGGTGGCAG AGCTCGCCCC CATCGTCGAG
GCTCGTTGTG GGCTCGAGAT CGGAACGGAG ACCCTCGCGG TCGCGAACCT GTCACGGCGC
GCGTGGGCGA TCCACAATGC GCGTTCCTAC GCAGCCTTGA TCGGTCGCTT GTACCCGCAG
GGGGTACCCG CTGGTGCGGC CGAGGTGAGC GGAGCCATGC TCGGCGCGGT GCTCGCGGCC
CTCTCGCCTC GCGTTCTGGG GCAGTACGTG CCGGGGGGCG GCGACGAAGA GCCCCTGCTC
GTGCTGGTAG GCCAGAACGC CCAGCATCTC GCGTCAGGGG CTGGGACGGA TCTCGCCACG
GTGGCGAGGT GGGTGCTCTC GCACGAACTC GCCCATCGGG CGCAGTTCTT CGCGCGCCCC
TGGCTGCTCG AGACGCTCTA CGCATCGCTC GCCGAGGTCA TCGCTGCGCG ACCGGCGACC
CCGGTCGATG CGGTGAGTTC GCTGCTCAGC TGGTTGGGTG GCGACCGCCG CCTCGGGGAG
CTCGGGCCAC TCGAGCTGGT CCTCCCAGAA CGTGCTGCTG CCTCGTTGGC TCGTGTCAGC
GCCATCATGA GCGTCATCGA GGGCCACGCG GACTGGGTCA TGCGGACCCT CCCCTCGGGG
ACCGTGCCGG GTGACGACGA GCTGGCTCGT GTCGTCGACC AGCGTCGCAG TGCGCGGGGT
CTCGCGCGCA TCGTCGCGCG ACTCCTCGGA CTCGACGCGA AGGCTCGCCA GTACGAGCGC
GGTCGTCGGT TCTTTGAGCG CATCGAGGCA GAACGGCCTG GCAGCGCGCT CGACGTGTTC
GAACGCGCCG AGTCGCTCCC AACGCTTGCC GAGCTCGACG CGCCAGAGAC GTGGCTGGCG
AGGGTCGGTG CGGCCTAG
|
|---|
| Protein sequence | MVSPVSHQVA TLSIRALVPD TAPPPLDLIG LVAELAPIVE ARCGLEIGTE TLAVANLSRR
AWAIHNARSY AALIGRLYPQ GVPAGAAEVS GAMLGAVLAA LSPRVLGQYV PGGGDEEPLL
VLVGQNAQHL ASGAGTDLAT VARWVLSHEL AHRAQFFARP WLLETLYASL AEVIAARPAT
PVDAVSSLLS WLGGDRRLGE LGPLELVLPE RAAASLARVS AIMSVIEGHA DWVMRTLPSG
TVPGDDELAR VVDQRRSARG LARIVARLLG LDAKARQYER GRRFFERIEA ERPGSALDVF
ERAESLPTLA ELDAPETWLA RVGAA
|
|---|
| |