Gene Afer_1914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1914 
Symbol 
ID8324010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp2001596 
End bp2002516 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content74% 
IMG OID644953038 
ProducttRNA(Ile)-lysidine synthetase 
Protein accessionYP_003110492 
Protein GI256372668 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGCCTA GCCCGTCGTG GGTCGAGGCT GCCCAGCGCC GAGCTCGTGA GCTCGGCATC 
GATCTCGCCT CGCTCGGTGA GCGGCTGTGG CCTCTCGATG ACGACCCGGT CCGCGTCGGC 
GTCTCGGGTG GCGCCGACTC GCTGGGTCTC GCTGCGCTGC TGGCGTTCGG TGGCAAGCGG 
GTCCTCGCGA TCCACGTCGA CCACGGCCTG CGCCCGGGCT CGGCCCGAGA AGGAGCCGAC 
GTCGCCCGCC AGCTCGCTCC GCTCGGGATC TCGGTGCTCG AGCGCCGTGT GCGCGTGATC 
CCTGGCCCCA ACCTCGAGGC GCGCGCGCGC TCGGCCCGCC TCGGCGCCCT CGGGGACGCC 
GCCCGGGCAC ACACGATGGA TGATCAAGCC GAGACGGTGC TGCTGAATCT CCTGCGGGGG 
AGCGGGCTCG TCGGTATCGG CGCCATGGAG CCCGGCCCCC TCCACCCGGC ACTCGGCCTT 
CGGCGCTCAG AGCTCGCGCG CGTCTGCGAG GCCGCCGGAC TCGTGCCGCT CGTCGATCCC 
ATGAATCAGG ACGTACGCTT TCGGCGCGTG CGCGTGCGTA CCGAGCTGCT CCCGCTCGCC 
GCCGCGATCG CAGAGCGTGA CGTCGTCCCG CTGCTGGCGC GCGCGGCGGC GCACGCCCGC 
GAGGCCGTGC GCCTGCAGGC GCGCTACCCG GAGCTCGCGC CGGCGACGAC CCAGCTCGCG 
ACGTGGGTCC GACACCAGAC AGGCCTTCGA CTGTCGGCGG CGCATCGGCG TGCGCTCGTC 
CAGGTCGCCG ATGGTACTCG CCGAGCGCAT GCACTCCCGA GCGACCTCGA CGTGCGACGC 
GTGGGCTCGT CGCTCGTCCT AAGCTCAGGT GGGCGAGAGA TCGCCCGTCT CGGGCTCGAG 
TCCGAAGGGA GGCGCCCGTG A
 
Protein sequence
MRPSPSWVEA AQRRARELGI DLASLGERLW PLDDDPVRVG VSGGADSLGL AALLAFGGKR 
VLAIHVDHGL RPGSAREGAD VARQLAPLGI SVLERRVRVI PGPNLEARAR SARLGALGDA 
ARAHTMDDQA ETVLLNLLRG SGLVGIGAME PGPLHPALGL RRSELARVCE AAGLVPLVDP 
MNQDVRFRRV RVRTELLPLA AAIAERDVVP LLARAAAHAR EAVRLQARYP ELAPATTQLA 
TWVRHQTGLR LSAAHRRALV QVADGTRRAH ALPSDLDVRR VGSSLVLSSG GREIARLGLE 
SEGRRP