| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1896 |
|---|
| Symbol | |
|---|
| ID | 8323992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1982271 |
|---|
| End bp | 1982924 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644953020 |
|---|
| Product | PBS lyase HEAT domain protein repeat-containing protein |
|---|
| Protein accession | YP_003110474 |
|---|
| Protein GI | 256372650 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1413] FOG: HEAT repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.609577 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAGCG CGAACCCATT GGATGTCCTC GATGCACCGG TATCGACGCT GCGCGCCCTG
GTGGCAGCAG GAGGACGCAG TGCTCGGACG GCGGCGATCG CGCTGGCACG CCGCGGTGAT
GAGCAGGATC TCGCCTGGCT GCTCGCTCAC GACGACGCCG ACGTCCGCGT CGGGGCGCTG
TGGGGGGCGG GTCCCTCTGC GATCGGGCAT CAGCGTGCGC GGGGCCTGCT CGGAGACCCT
GACCCGCTCG TCGTCGAGGC GGCCTGTTGG ATCCTCGGCG AGGTCGGCGA TCGGGACGAC
GTCGCAGTGC TCGTGACCAG CGCTCGTGTC CACGAGGACC TCAGGGTTCG CGAAGCGGCG
ATCGCCGCGC TCGGATCCAT CGGTGCGCCC GAGGGTCTCG ACGTCGTCAT CGACGCAGCT
CGCAACGACA AGCCGGCGGT TCGACGGCGG GCGGTGGTTG CGCTGTGCGC CTTCGATGAC
CCACGTGCCG ACCGCGCGCT CCGCGCTGCC GCCACCGATC GAGACCGCCA GGTGCGGTCG
GTGGCGGCGG ACCTGCTTCG CGATCGGGGT GGGCTCGGCG TCGTCGATGA CGAGGACACG
AGTGGGACTC CATCCGGTGC CGACCCGTCG CCCGACGCTT CGGATCGCGC TTGA
|
|---|
| Protein sequence | MSSANPLDVL DAPVSTLRAL VAAGGRSART AAIALARRGD EQDLAWLLAH DDADVRVGAL
WGAGPSAIGH QRARGLLGDP DPLVVEAACW ILGEVGDRDD VAVLVTSARV HEDLRVREAA
IAALGSIGAP EGLDVVIDAA RNDKPAVRRR AVVALCAFDD PRADRALRAA ATDRDRQVRS
VAADLLRDRG GLGVVDDEDT SGTPSGADPS PDASDRA
|
|---|
| |