| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1873 |
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| Symbol | |
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| ID | 8323969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1961630 |
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| End bp | 1962652 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644953003 |
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| Product | secreted protein containing a PDZ domain |
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| Protein accession | YP_003110457 |
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| Protein GI | 256372633 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTCAGA GGAGGATGAG CGACGCCGTC GTTGCCGGGG CGAAGCTGTG GGTCGTCGGA
TGGCTGCTCC TCCTGCTCGG GTGGGGGGTG TTCGGACGCA TCGGTGAGGT GGCCCTTGCG
CCGGGTGCGA CCGTGGCGAT CGCGCCGCTC GTGCGCGTGG CGGGGCGGCC GCCCGCCACG
CTGGACATCG CGAGCGCGAC CACGACCGCG CGACCGCTCT CGCCACTTGG TTGGCTGATC
GCAAGCTTCG ACCCCGCCGA ATCGGTGGTC CCCGAGATCG TGGGGGCACG TTCTGGCGAT
CCAGCCGTGC TCAGCGCATC GCAGCAGTCG GAGATCGCTG CGCTGGTCGC GGCCTGTCGA
GCAGTCGGCG TTCGGGTCGA GTCGATGGAG GGCCAGGTGG TGCGTGGTGT GCTCCCGACG
TCTCCGCTCC GGGGTGTCGT GCACGCTGGC GATCTCGTGG TCGGGGTCGA CGGCGTTCCC
GTGCCGACGC CAGCAGCGTT CGCCAGCGCC GTCGCCGCGG CCGTCACCCA CACGCGTGTG
ACCTTGTCGT TGGTGCGTTC GACGGCCTCA GGACTCTCGC GGTTCGTCTC GTCGGTGACG
GTGCCCTCGG TCGCCGGGGA ACTCGGACTC GTGACCTCAC CTGCGACCGC CGCCATCACG
CCGGTGCATC TCGAGCTGCG CCTGCCCGAC GCCGACACGG CGTCGTCAGG GCTGGCGGTG
GGCCTGGCGA TCGCCGACGA ACTTCGTCCT GCGCTGCTCG CCCGCGCCCC GCGCCAGCCG
ATCGCCGCGC TCGCCGGGAT CGATCCGAGC GGGGCACTCG TGGCCGTGTC CGGACTTCGC
CAGCGTCTCC TCGCGGCTAG AGTTGCCGGC ATCCAGACGG TCATCGTCGC AACATCGCAA
ATCGTGCAGG CGAGGGCCGA CGCGGCGGGG AGAATGCGCG TGCTTGCAGC TGCCACCTTG
CGTGGAGCCC TCCAGCTCCT CGACCGGCTC CGGCCGGAGG CGGCGGCGCA CAGCGCTCGG
TAG
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| Protein sequence | MRQRRMSDAV VAGAKLWVVG WLLLLLGWGV FGRIGEVALA PGATVAIAPL VRVAGRPPAT
LDIASATTTA RPLSPLGWLI ASFDPAESVV PEIVGARSGD PAVLSASQQS EIAALVAACR
AVGVRVESME GQVVRGVLPT SPLRGVVHAG DLVVGVDGVP VPTPAAFASA VAAAVTHTRV
TLSLVRSTAS GLSRFVSSVT VPSVAGELGL VTSPATAAIT PVHLELRLPD ADTASSGLAV
GLAIADELRP ALLARAPRQP IAALAGIDPS GALVAVSGLR QRLLAARVAG IQTVIVATSQ
IVQARADAAG RMRVLAAATL RGALQLLDRL RPEAAAHSAR
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