| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1850 |
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| Symbol | |
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| ID | 8323944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1936828 |
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| End bp | 1937631 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644952981 |
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| Product | HAD-superfamily hydrolase, subfamily IIB |
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| Protein accession | YP_003110437 |
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| Protein GI | 256372613 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGCT GGAGGGACGT CGTCACGGCT CTCGTCAGAG CGCACCGCCC GCTGGTTGCG
CTCGACTTCG ATGGGACCCT CGCCTCGATC ACGGCGGATC CCTCGCGCGC CAGCATCGCT
CCGGATCTCC TCGACGATCT GAGCGGGCTC GCGCGCACGC TGCGCATCGC GATCGTGTCC
GGAAGACCTC GCTCCTTCCT CACCGATCAG CTTGGCGACC TTGCCGTGCG GATCGAGATC
GCCTCCAACT ACGGGCGCGA CGAGACGGCC ACGCCCGCAG ATCGCGACCT CCTCGACCGG
GTGGCGAGAG GCCTTGCGGA CCTCGCGGCC GATGGCGCGC TCATTGAACG CAAGCCGACG
TCGGTGGCCC TGCACGTTCG GGAGCATCCC GAACTCGCCG CTCGAGCCGC GGTGACGGTC
CAGAGGTTGG CCGCCGCCTA CCACCTTGAT CTTCAAGAAG CTCGCCAGGC ATACGAGCTG
CTCTTGCCTT CATCGGCGAC GAAGGGCACG GCAGTCTCGT CCCTGATCAC CGACGACACC
GACTTCGTGC TCTACGCCGG TGACGACGTC GGCGACATCG CCGCCGTCGA AGCCGTGCGC
GGTCACGGCG GGCCGTCGTG GTGCCTCGCG ATCGACTCTG GTGAGCTCCC TCCTGCGCTC
GCGGCGATCA GCGACGAGGT CATCGATCAG CCCGAACTGC ACCGCCGTCT CCACTCCCTC
CGCGAACTCC TCGCCTCGCG TCACGCCGAT CATGACGGTC CTGTCGACGA TTTTGCTCAA
CGAAGTCGCG AGGCCGACCG ATAG
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| Protein sequence | MTGWRDVVTA LVRAHRPLVA LDFDGTLASI TADPSRASIA PDLLDDLSGL ARTLRIAIVS
GRPRSFLTDQ LGDLAVRIEI ASNYGRDETA TPADRDLLDR VARGLADLAA DGALIERKPT
SVALHVREHP ELAARAAVTV QRLAAAYHLD LQEARQAYEL LLPSSATKGT AVSSLITDDT
DFVLYAGDDV GDIAAVEAVR GHGGPSWCLA IDSGELPPAL AAISDEVIDQ PELHRRLHSL
RELLASRHAD HDGPVDDFAQ RSREADR
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