Gene Afer_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1838 
Symbol 
ID8323932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1923586 
End bp1924278 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content67% 
IMG OID644952969 
ProductNUDIX hydrolase 
Protein accessionYP_003110425 
Protein GI256372601 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTTG AGCGACGCGA TCTCGAGGTG GCGCTCCTCG AGATCGAGAG CATTGCGCGG 
ACGGGACTCG CGTTCACGAG TTCTGGGTAC GAGCGCGAGC GCTACGAGGA GATCTTGCGA 
GTCGTGGTGA GACTCCGCAA CGCGGAAGCC CCTATCGGGG AGCCCGAGGA CGAGACCGTC 
GGTGCGCTCA TCAGGGGAGT CGCCGAGGGT GTCGCCGGCT ACGTCACGCC CAAGTGTGCG 
GTCGGGGCGG TCGTCGTCGA CGACTCGAAC CGCATGCTGC TCATCCAGCG AGCCGACTCG 
GGTGTGTGGC TCTATCCGAC GGGTTGGGCC GACGTCGGCT ACTCCGCGGC CGAAGTCGTC 
GTGAAGGAGG TCTTCGAGGA GACCGGCATC GAGGTCGTGC CCGAGGCGAT CCTCGGTCAG 
ATCGACGGCC TGCGGCGTGG CTTCACCAGG GTCGCGATGT ATTCGACCAT CTTCTTGTGT 
CGTCCGGTCG GCGGGACGCT TCGGGCGCAT CCGCTCGAGG TGCGTGCGGT GCGGTGGTTC 
GAACGTGAGG AGCTCCCCGA GAACGTGGCT GCGCTGATGC GGCTCCCGTG GCTCGAGCGC 
GCCTTTCATC GAGACGAACC GCTGACCCGC GCGTGGGCCG CCTACTTCGA TCCGCCTCGG 
CCCGGACGCG TCGACGGCGT CACTCCGCGT TGA
 
Protein sequence
MELERRDLEV ALLEIESIAR TGLAFTSSGY ERERYEEILR VVVRLRNAEA PIGEPEDETV 
GALIRGVAEG VAGYVTPKCA VGAVVVDDSN RMLLIQRADS GVWLYPTGWA DVGYSAAEVV 
VKEVFEETGI EVVPEAILGQ IDGLRRGFTR VAMYSTIFLC RPVGGTLRAH PLEVRAVRWF 
EREELPENVA ALMRLPWLER AFHRDEPLTR AWAAYFDPPR PGRVDGVTPR