Gene Afer_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1798 
Symbol 
ID8323891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1884191 
End bp1885057 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content69% 
IMG OID644952928 
ProductATP synthase F1, delta subunit 
Protein accessionYP_003110385 
Protein GI256372561 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.608577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGAGC TCGTGAAGGG CTACGCCCTC GCCCTGCGTG ATCTCGCTCG CGAGGCCGGA 
ACGGCCTCGG AGCTCGAACG CGACGCTCGC GGCGTCGCCG AGCTGTGCGA GCGCTTCGTC
CAGCTCGCTG TCGCCCTCGA CGATCGAGCC GCCGACGTCG ATCGTCGTCA AGGAGTGCTC
CACGACCTCG TCGGGGAGCG CGTCAGCTCG CTCGCTCTGC GGCTCTTCGA CGCTGTCGTC
GCGTGGGAGG TCGTCGGCGA GGTGGTGCAT TCGCTCGAGG AACTCCCTGA GCTGGTCGCC
TCCGACATGG TCCTCGAGGG CCCCGGCGAC TTTGCCACCA TCGGGCGCGT CATCGGCTAT
GCGCGGGCCA TCTTCGAGGA CCTCGGAGCG CGCGACGAGC TCGAGCCGGT GCTCCACGAA
CTTCGCGGTG TGGCACAGGT GCTCGAACGG GATCGGGCAC TCCAGCGCGT GCTGTCGGGT
TTCGAGGGAA CGCGCGAAGC ACGCCTCGCC ATCATCGGGG ATCTGTTTGG GCCGCGCGTG
AGCGTCCGGA CGACCTGGAT CCTTCGTGCG GCCGTCGCGA CGAGTTCCGT GCGACCGATC
GGCCGGGTCG TCGATCGGCT GCTCGAACTC GCCGCCCGAC AGCTCTCGTT GCGGGTCGCA
ACGGTTCGCA CGGCTCGTTC GCTGCGTGAC GATGAGGCGG ACGCCGTCCG TACGCACCTC
GAGCGGCTCG TCGGCCAGCG CGTGGAGGTC GAGTGGGTGG TGGACGAGTC GGTCATCGGC
GGCATCGTGG CGATCGTTGG CGATCGTCTC TGGGATCAAA GCGTTCGACG TCAGCTCGAC
GACGCTCGTC GTCTCGTCAG CGCGTAG
 
Protein sequence
MRELVKGYAL ALRDLAREAG TASELERDAR GVAELCERFV QLAVALDDRA ADVDRRQGVL 
HDLVGERVSS LALRLFDAVV AWEVVGEVVH SLEELPELVA SDMVLEGPGD FATIGRVIGY
ARAIFEDLGA RDELEPVLHE LRGVAQVLER DRALQRVLSG FEGTREARLA IIGDLFGPRV
SVRTTWILRA AVATSSVRPI GRVVDRLLEL AARQLSLRVA TVRTARSLRD DEADAVRTHL
ERLVGQRVEV EWVVDESVIG GIVAIVGDRL WDQSVRRQLD DARRLVSA