Gene Afer_1777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1777 
Symbol 
ID8323870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1862263 
End bp1863201 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content66% 
IMG OID644952907 
ProductCitrate (pro-3S)-lyase 
Protein accessionYP_003110364 
Protein GI256372540 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGCCC GATCTCGTGA TCTCCTCCGT CGTTCGTGCC TCGCGGTACC TGGATCGTCC 
GATCGCTTCA TCGAGCGAGC GCTGACCATC CCGGCTGACA TGGTGTTCCT CGATCTCGAG
GACTCGGTCG CACCCAGCGA GAAGCTCGAG GCCCGCGGGC GGGTGGCCCG TGCGATCCGC
TCGTTCGACT GGGGCGAGCG GGTGGTGTGC GTCCGGGTGA ATGCCTGGGA TACGCCGCTC
ACGTTGCGCG ACGTGATCGA GGTGGTGACA GGGGCTGGCC CGCGTCTCGA CGAGATCATG
TTGCCGAAGG TGCAGCGCCC CGACGAGGTG GTGGCGCTCG ATCTCGTTCT CACGCAGCTC
GAGGCCGAAC TCGGACTCGA GCGCGGCCAC ATCGGCATCG AGGCCCAGAT CGAGACGACC
CGGGGACTGA TCAACGTCGA GGCCATCGCA ACCGCGTCGT CACGGCTCGA GACGCTCGTC
TTCGGACCGG CGGACTTCTC GGCGTCGATG CAGCTGCCGG TGCTCACCGG TGGGGCTGCG
ATTCCGGAGT ATCCGGGTGA CCACTTTCAC TACGTCCTCT CGAAGATCCT GATGGCGGCG
CGCACGGCGG GTCTGCAGGT GATCGACGGC CCGTTCTTGC GCATCCACGA CCTCGAGGGC
CTCAAGGCCT CCGCGCTTCG ATCGGCCATG CTGGGCTACG ACGGCAAGTG GGCGTTGCAT
CCGACGCAGG TGGACGTCCT CAACGACACG TATCGTCCGT CACAGGAACT CTTCGATCGC
GCCGTCGCCA TCTTGGACGC CTACGAGCAG GCCACGACGT CGGACCGTCG TGGAGCGGTC
ATGTTCGGGG ACGAGATGAT CGACGAGGCG AGTCGCAAGA TGGCGGAGAA GTTCGCCCTC
CGTGGCCGTC GCGCCGGCAT GACGCCGTCG GCGTCGTAG
 
Protein sequence
MGARSRDLLR RSCLAVPGSS DRFIERALTI PADMVFLDLE DSVAPSEKLE ARGRVARAIR 
SFDWGERVVC VRVNAWDTPL TLRDVIEVVT GAGPRLDEIM LPKVQRPDEV VALDLVLTQL
EAELGLERGH IGIEAQIETT RGLINVEAIA TASSRLETLV FGPADFSASM QLPVLTGGAA
IPEYPGDHFH YVLSKILMAA RTAGLQVIDG PFLRIHDLEG LKASALRSAM LGYDGKWALH
PTQVDVLNDT YRPSQELFDR AVAILDAYEQ ATTSDRRGAV MFGDEMIDEA SRKMAEKFAL
RGRRAGMTPS AS