| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1748 |
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| Symbol | |
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| ID | 8323839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1836788 |
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| End bp | 1837738 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644952879 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_003110337 |
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| Protein GI | 256372513 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACACCC ATCTCCCAGC GTCCCAGCCT GGCGACACGA AGCGCTACGA CCCGAACCGC
GCGCTCGCCA TACGGCTGGT GCGGCCGCGC GTGTCGGTGA CGGAGCGGCT CGCGAACATC
TGGCGCTACC GCGATCTGCT GCGCGGACTC ATCGTCAAGG AGATCCGCGT CAAGTACAAG
GACTCCTTCC TCGGGTTCTT GTGGTCGCTG GTGAACCCGG CGATGTTCAT CTTGATCTAC
TACATCGTCT TCCAGAAGGT GCTGGGTTCT GGCATCCCGT TGTTCGCGAT CTTCCTCGCC
ACCGGGCTCC TCTGCTGGAA CCTCTTCCAG ACCGGGATCA TGGGCGCGAC CGGCGCAGTC
GTGGACAACG CGGGACTCGT CAAGAAGGTC GCGTTTCCTC GCGAGATCCT GGCCTTGGCC
TCGGTCGGCT CCGCGTCGGT CTTCTTCGTG TTCCAGGCCG TGGTGCTCGC GGTGTTCCTC
GTCGTATTCC AAGTCGTGCC GTCGGTCAGC TACCTGTGGG TGGCGCTCAT CGGGCTCGTT
GCGCTGCTCG TGTTCGCTTC CGGCCTTGGC ATCCTCGTCT CTGGGATCAC GGTCTACCTG
CGTGACGTGC GCCATCTGAT GGAGATCCTG CTCCAGGCCT GGTTCTGGGC AACCCCCGTC
GTGTACGCGT TCGAACTCGT CGCGAACAAG TTCGCAGACC ATCACATCCC GGTCTGGGTG
TATCTCCTCA ATCCGGTGAC GCCGGTCGTG CTCGCGTTCC AGAGGACGTT CTACGCCAAG
ACGGATCCCT ACTCGGTCGC GTCGCACACC GTCGTCCAGA TCTTGCCGAC GGCGGGCCCG
ATGTGGTACT TCTGGGGCGT GCTCGGCGTC CTCGTCGCTG GTGTCGTGCT CTTCGTGGTT
GCCCTGTGGG CGTTCGGACG ACTCGAAGGC AACTTCGCGG AGGAGCTCTA G
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| Protein sequence | MDTHLPASQP GDTKRYDPNR ALAIRLVRPR VSVTERLANI WRYRDLLRGL IVKEIRVKYK
DSFLGFLWSL VNPAMFILIY YIVFQKVLGS GIPLFAIFLA TGLLCWNLFQ TGIMGATGAV
VDNAGLVKKV AFPREILALA SVGSASVFFV FQAVVLAVFL VVFQVVPSVS YLWVALIGLV
ALLVFASGLG ILVSGITVYL RDVRHLMEIL LQAWFWATPV VYAFELVANK FADHHIPVWV
YLLNPVTPVV LAFQRTFYAK TDPYSVASHT VVQILPTAGP MWYFWGVLGV LVAGVVLFVV
ALWAFGRLEG NFAEEL
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