| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1739 |
|---|
| Symbol | |
|---|
| ID | 8323830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 1825039 |
|---|
| End bp | 1825968 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644952870 |
|---|
| Product | UbiA prenyltransferase |
|---|
| Protein accession | YP_003110328 |
|---|
| Protein GI | 256372504 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.463163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGCAA CCACAGCGAT CGAGCGATCG CACGCGAGCG GCGAGCGCTC CACGGGACGG
ATCGTACGTG GCCTGATCGT CGCGATGCGA CCCAAGCAGT GGGCCAAGAA CGCTCTCGTC
GTAGCGGCAC CGCTCGCAGC GGGCAGCATC CTTCGGACCC ACGTCCTCGT GCCGACAGCC
CTCGCCTTCG TCGCCTTCGT CGCGATCTCG GCCGCGACGT ATCTGCTCAA TGACACTGCG
GATCGAGAGC GCGACGCCGC CCACCCGACC AAACGCCGAC GCCCGATCGC GGCCGGCATC
GTCCCGGTAT GGCTCGCCCT TCTCACGGCA ACCATCCTCG GCCTCGGGGC CCTCCTCCTC
GCCGCCCTCG CCATCAACCT GGCGACGCTC GCCGTCCTCG CGACCTACGC CGCCTCGACG
CTTGCCTACT CGCTCAAGCT CAAGCACGAA CCGATCCTCG ACATCGCGAT CGTGGCCGGC
GGCTTCGTGC TGCGCGCCGT CGCGGGAGGC ATCGCAGCGC ACGTCTTCAT CTCGCACTAC
TTTTTGCTCG TCGCCGGCTT CGGCGCGCTC TTCGTCGTGG CCTCGAAGCG CTATGCCGAG
CTCACCGCGA CCGACGGCGA GAGCCGCACC CGCAGCGTGC TCGCTTCGTA CTCACCAGGC
TTCTTGAACC TGACTCGGGC ACTCGCTGCC ACCACGACAG TCGTGACCTA CTGCTTCTGG
GCGTTCGAGC GCAGCGCCGG GCTATCGGAT GGTCGCCTCG TGCTTGGCTT GTCGATCGTG
CCGTTCACGA TCGGAGTCCT TCGCTACGCC CTGCTCGTCG AGCACGGCCA CGGGGAGGCC
CCCGAGGACC TCCTCACCGC CGATCGCACG CTGCTCGGGA TCGGCATGCT CTGGGTCGCG
CTCGTCGGAG GAGCGATCTT CCTTGTCTAG
|
|---|
| Protein sequence | MKATTAIERS HASGERSTGR IVRGLIVAMR PKQWAKNALV VAAPLAAGSI LRTHVLVPTA
LAFVAFVAIS AATYLLNDTA DRERDAAHPT KRRRPIAAGI VPVWLALLTA TILGLGALLL
AALAINLATL AVLATYAAST LAYSLKLKHE PILDIAIVAG GFVLRAVAGG IAAHVFISHY
FLLVAGFGAL FVVASKRYAE LTATDGESRT RSVLASYSPG FLNLTRALAA TTTVVTYCFW
AFERSAGLSD GRLVLGLSIV PFTIGVLRYA LLVEHGHGEA PEDLLTADRT LLGIGMLWVA
LVGGAIFLV
|
|---|
| |