| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1731 |
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| Symbol | |
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| ID | 8323822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1813805 |
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| End bp | 1814941 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952862 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_003110320 |
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| Protein GI | 256372496 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATCTCC AGGGAGTGGG ATGCGCTGAT CGCTCCGACG GTGTCCGCCC GCGAAGCTTG
GCGGACCTCG TGGACGATCT CGTCACGGGT CGGATCGCTC CTCGCACGCA CCTGCAGCCG
ATCGTCAACC TGCACGGTCC GCGGATCGCG GGCTACGAGG CGCTCGCGCG GCTCGACCCC
ATGGGCAGGA TCGGACCTGA TCGCGTGATC GCTGCCGCCT GGGACCTTGG CGTGGGGGCG
GAGCTCGAGA CCTTGTGTGC GCTCGCTGCG CTCGAGCGAC GAGCGGATCT GCTCGGCGAG
CACTTTCTCG CGATCAACGT GAGTCCAGTG ACGCTCGAGT CGCGCGCCTT CGAGGCCGTC
GTGGGACTGC CCTCGCTCCA GGGGTTGGTC ATCGAACTCA CCGAACACGT TCCGCTCCAT
GACCTGCCGG ATCTCCCCGC GAGACTCGAC CTCCTTCGGG AACGCGGCGC CATCATCGCC
ATGGACGACG CGGGCGCCGG GTACGCGGGC CTTGCGGCGC TCCTCGTCGT GCGACCGGAG
ATCGTCAAGC TCGATCGAGG GCTCGTGAAC GGGATCGACC GTGACGCGGC GCGCAGTCGT
CTCGCATCCG CCTTCGGCGC ATTCCTCGGT GAACTCGATG CGTGGCTCCT TGCCGAGGGG
GTCGAGACCT ACGGAGAACT CGAAGAGATC GTGCGGATCG GCATCCCTCT TGCGCAGGGT
TACCTGTTTG GCCGTCCATC ACCCGAGCCG ATCGATCTCG ACCAGGTGCT GCGTGAACGA
CTCATGCACG TCCACAGGCC ACGTTCGAAC GACAGCTGCG CTGGCGAGTA CCTTGAGCCT
GCCGAACGTA TCGGCGCACT GGCCGACGCA CCGCCGACGG GTTGGTGGGT GCTGCAGCCG
ACAGGGCGCA AACCCCTGGC CGTCGGCTGC TGTTGGTCGA ACGGCGAGCG ACGCCAGCGT
TGGGAACGAC CCCTCGTCGT CCACGAAGAA GACCCCCTCG ACGTGCTGCT CCAACGGGCG
CTCGTGCGCG ACGACGGTGC GCTCGAGCCG ATCGTGGTCG TCGACGCCGA CGGCGCGGCG
TGTGGCGTCG TGAAGCCGTC GCGGGTCGTT CGGTGCGTCT TGGACGGTCG CCGATGA
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| Protein sequence | MDLQGVGCAD RSDGVRPRSL ADLVDDLVTG RIAPRTHLQP IVNLHGPRIA GYEALARLDP
MGRIGPDRVI AAAWDLGVGA ELETLCALAA LERRADLLGE HFLAINVSPV TLESRAFEAV
VGLPSLQGLV IELTEHVPLH DLPDLPARLD LLRERGAIIA MDDAGAGYAG LAALLVVRPE
IVKLDRGLVN GIDRDAARSR LASAFGAFLG ELDAWLLAEG VETYGELEEI VRIGIPLAQG
YLFGRPSPEP IDLDQVLRER LMHVHRPRSN DSCAGEYLEP AERIGALADA PPTGWWVLQP
TGRKPLAVGC CWSNGERRQR WERPLVVHEE DPLDVLLQRA LVRDDGALEP IVVVDADGAA
CGVVKPSRVV RCVLDGRR
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