| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1638 |
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| Symbol | |
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| ID | 8323729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1727456 |
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| End bp | 1731025 |
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| Gene Length | 3570 bp |
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| Protein Length | 1189 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644952769 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003110227 |
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| Protein GI | 256372403 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCTCGT TCGTCCACCT CCACACTCAC ACCGAGTACT CCATGCTCGA CGGCGCGTCG
CGCATCAACG ATCTCCTGCG TGCCGCAGCC GCCGACGGCC AGCCCGCCCT CGCGATCACC
GACCACGGCA ACCTCTACGG TGCGCTCGAG TTCTACAAGG CCGCCACACG CACCGGCGTG
CGCCCCATCA TCGGCCTCGA GGCCTACATG GCGGGGGGCT CCCGGTTCGA GCGCCCGCAA
CGTCGCGGAC GCCTCGACGA CACGGGCGGC GAGAGCGAGC GAGGTGAGAA GCTCTACTAC
CACCTCACGC TGCTCGCGGA GAACGAGACC GGTTACCACA ACCTCATCCA GCTCTCCTCG
CGTGCGTTCC TCGAGGGCTA CTACTACAAG CCCCGCATCG ACTTCGAGCT CCTCGAGGAG
CACCGCGAGG GACTCATCGC GCTCACCGGG TGTCTCGGTG GGCTCGTCCT CCAGCACCTC
CTTCGCGGCG ACGAGGAGGG AGCGCGCACG GTCGCCGGAA CGCTGCGCGA GATCCTCGGC
CCGGACAACG TCTTCGTCGA GCTCCAAGAT CACGGGCTGG CCGAACAGCG CCGAACCAAC
CCCCAACTCC TCGAGCTCGC CAAGCACCTC GGGCTGCGGA CCGTGGCCAC CAACGACTCC
CACTACACGC ACCGCGAGGA CCACGAGACC CACGATGCGC TGCTGTGCGT CCAGACCGGC
GCGACCATCA ACGACCAGAA TCGCTTCCGC TTCGAGGGAT CGGAGCACTA CCTCAAGAGC
GCCGAGGAGA TGCGTGAGCG CTTCCGCGAG GTGCCCGAGG CCTGTGACGC GACCCTCGAC
ATCGCCGAGC GCTGCTCGTT GGAGCTGACC TTTGGCCAGC CGGCGCTTCC CGAGATCGAC
ATCCCGGTCC GGATCACGGG TGCGACCTAC GACGAGCGCG CAGGTGAGTA CCTCGCCGAG
CTGGTCTGGC AGGGCGCGCG GGCGCGCTAC GGCAACGATC TCGACGAGAC CACGAGCGAG
CGGATTCGCT ACGAGCTCTC CGTGATCGAG TCCATGGGCT TTCCGGGCTA CTTCCTCGTG
GTCTGGGACC TGATCCGTCA TGCCCGCGAG GCTCACATTC GCGTCGGCCC GGGACGAGGT
AGCGCGGCGG GCAGCGTGGT CGCTTACTGC CTCGGGATCA CCCAGATCGA TCCGCTCGCC
TACGACCTCA TCTTCGAGCG CTTCCTCAAC CCAGGCCGCA AGCAGATGCC CGACATCGAC
ATGGACTTCG ACGAGCGCTA CCGAGGCGAG ATGATCCGCT ACGCGGCCGA GCGCTACGGG
CATGATCACG TCGCCCAGAT CGTGACGTTC TCCACCATCA AGGCTCGAGC TGCCGTACGC
GACGCCGCAC GGGTCCTTGG CTACCCGTAC GCCGTCGGCG ACAAGATCGC CAAGGCGATG
CCGCCGCTCG TCATGGGACG AGACACGCCG CTTGCTGCCT GCCTCGAGCT CACGCCCGGC
CACGAGGACG GCTACGCTCA AGCGGCGGCC CTTCGCGAGA TGGTCGAGAG CGATCCGGAC
GTGGCGCGGG TCGTCCAGGT CGCCAAGGGC CTCGAAGGCC TGCGGCGTCA GGACGGCATC
CATGCAGCCG CGGTGGTGAT CTCGCGTGAC CCGCTGACGG AGTACCTGCC CATCCAACGC
AAGCCCGATC CAGGCCAGGA TCCATCCGAG GCACCCATCG TCACGCAGTT CGAGATGCAT
GGCGTGGAGG AACTCGGCCT CCTGAAGATG GATTTCCTCG GGCTGAGGAC CCTCTCGGTC
ATCGATCGCG CCGTGGAGCT GATCCGGGCG ACGCGGGGCG TCGACCTCGA CATCGACGCC
ATCGCCCTCG ACGACGAGGC CACCTTCGCG ATGCTGCGCG CGGGTGACGC CATCGGTGTC
TTCCAGCTCG AAGGCGGGCC GATGCGCCAG CTCATGCGCC AGCTCGCCCC GAGCCGCTTC
GAGGACGTGG CCGCGCTCGT GGCCCTCTAC CGTCCCGGCC CGATGGCGGC CAACATGCAC
GTCGACTATG CCGACCGCAA GAACGGCCGC AAGCCGGTGA GCTACCTGCA CCCAGACCTC
GAGCCGGTGC TCCGCGACAC CTACGGCCTC ATGATCTACC AAGAGTCGAT GATGCGCGTC
GCTCAGCAGA TCGCGGGCTA CTCCCTCGAG GAAGCCGACA ACTTGCGCAA GGCCTGCGGC
AAGAAGATCC GGACCCTCAT CGCCGCCGAA CGCGAGAAGT TCATCGCCGG TTGCGTCGCG
AGCGGCTACG GACCCGAACT TGGTACCGCA CTCTTCGACA TCATCGAGCC CTTTGCGGAC
TACGCCTTCA ACAAGAGCCA CGCCTTCGGC TACGGGCTCG TCAGCTATCA GACGGCCTAC
CTGAAGGCCA ACTTCCCCGT CCAGTTCCTC GCGGCCATCT TGACGAGTGT GCGCGACGAC
AAGGACAAGT TGGCCGTCTA CCTCGCCGAC GCCGCAGCCC ACCACATCGC GGTCCTCGTG
CCCGACGTCA ACGCCTCCGA CGTCGACTTC AGCGTCACGA GCGGTCCTGA GGGCGAGCAG
ATCCGTTTCG GCCTTGCTGC CGTGCGCAAC GTCGGGGAGG GCCTCGTGCG CTCGATCATC
GACGAGCGCA CGCGAAGCGG TCCGTTCACG AGCTTTGCCG ACTTCTTGCT GCGGGTCGAT
GCGAGCGTCC TGAACCGCCG CACCTTAGAG TCGCTCATCA AGGCCGGGGC CTTCGACTCG
TTCGGACACC CACGGCGGGC CCTCTACGAA GCGCTCGAGG GCGCGCTCGA ACGGGTCAAC
GAGCGGCGCC GCCAGCGCGA CCGAGGCCTC GGGTCCCTCT TCGAAGAGCC CTCCGAGGAC
GAGAGCGTCG TCCCGGATCT GCGCCTCGAC ATCGGTTCGG TGGAGTGGAG CACGCCAGAG
CTCCTCGCCT TCGAGCGCGA CATGCTCGGG CTCTACGTCT CCGCGCACCC GATGCACGGC
GTCAACGTCG ACCGGCTCGG ACGGGACGTC ACCCCCATCT TGGATCTCAT CGAGGCCGAT
ACGCCTCCCG GCGAACCGGT GACGGTCGTC GGGGCGATCA CAGCGCTCGC GCAACGGACG
ACGCGCAAGG GCGACCTCAT GGCCACCTTG CGGCTCGAAG ACCTGCAAGC TGGGATCGAG
GTCATGGTGT TCCCGAAGAC CATGGCAGAT CACGGGCTGC ACCTGAAGCA GGATGCCATC
GTCGCGATCA CCGGCCGTAT CGACGGCCGC GAAGACGGCC GCACGCTGGT CGCGCTCGCC
ATCGAGCCCG TCGATACGGC CGCGCTCACC AGTGACGACG CGGCGGACGG CGCCACTGAC
GCGGTGGTGC TGCGACTGCC CAAGCGCCTC GCCGTCCCAG ATTCGCTCGT TCGACTGCGT
AACGTGCTCG CGGATCACGT CGGCACGGCG CGTGCGGTCC TCGACATCGA AGGCATGCGC
TTCGAGCTCG CCAGCACCAG CGTCCGCCCC GGATCGAGCC TGGTGGGGCA CCTGCGCAAC
GTGTTCGGAG ATCAGGTCCG TGTCGACTGA
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| Protein sequence | MRSFVHLHTH TEYSMLDGAS RINDLLRAAA ADGQPALAIT DHGNLYGALE FYKAATRTGV
RPIIGLEAYM AGGSRFERPQ RRGRLDDTGG ESERGEKLYY HLTLLAENET GYHNLIQLSS
RAFLEGYYYK PRIDFELLEE HREGLIALTG CLGGLVLQHL LRGDEEGART VAGTLREILG
PDNVFVELQD HGLAEQRRTN PQLLELAKHL GLRTVATNDS HYTHREDHET HDALLCVQTG
ATINDQNRFR FEGSEHYLKS AEEMRERFRE VPEACDATLD IAERCSLELT FGQPALPEID
IPVRITGATY DERAGEYLAE LVWQGARARY GNDLDETTSE RIRYELSVIE SMGFPGYFLV
VWDLIRHARE AHIRVGPGRG SAAGSVVAYC LGITQIDPLA YDLIFERFLN PGRKQMPDID
MDFDERYRGE MIRYAAERYG HDHVAQIVTF STIKARAAVR DAARVLGYPY AVGDKIAKAM
PPLVMGRDTP LAACLELTPG HEDGYAQAAA LREMVESDPD VARVVQVAKG LEGLRRQDGI
HAAAVVISRD PLTEYLPIQR KPDPGQDPSE APIVTQFEMH GVEELGLLKM DFLGLRTLSV
IDRAVELIRA TRGVDLDIDA IALDDEATFA MLRAGDAIGV FQLEGGPMRQ LMRQLAPSRF
EDVAALVALY RPGPMAANMH VDYADRKNGR KPVSYLHPDL EPVLRDTYGL MIYQESMMRV
AQQIAGYSLE EADNLRKACG KKIRTLIAAE REKFIAGCVA SGYGPELGTA LFDIIEPFAD
YAFNKSHAFG YGLVSYQTAY LKANFPVQFL AAILTSVRDD KDKLAVYLAD AAAHHIAVLV
PDVNASDVDF SVTSGPEGEQ IRFGLAAVRN VGEGLVRSII DERTRSGPFT SFADFLLRVD
ASVLNRRTLE SLIKAGAFDS FGHPRRALYE ALEGALERVN ERRRQRDRGL GSLFEEPSED
ESVVPDLRLD IGSVEWSTPE LLAFERDMLG LYVSAHPMHG VNVDRLGRDV TPILDLIEAD
TPPGEPVTVV GAITALAQRT TRKGDLMATL RLEDLQAGIE VMVFPKTMAD HGLHLKQDAI
VAITGRIDGR EDGRTLVALA IEPVDTAALT SDDAADGATD AVVLRLPKRL AVPDSLVRLR
NVLADHVGTA RAVLDIEGMR FELASTSVRP GSSLVGHLRN VFGDQVRVD
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