| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1630 |
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| Symbol | |
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| ID | 8323721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1718934 |
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| End bp | 1719680 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644952762 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003110220 |
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| Protein GI | 256372396 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCGAG GTGCCGCCAT CATCACCGGG GCAACGCGCG GGATCGGTCG CAGCGTGGCC
GAGACGCTCG GAGCGAAGGG CTATCCGATC GTCGGGGTCG CGCGCCGCGA GGAGGAGCTC
GCGAGCCTCG AGAAGGACCT GCGCGCCGGT GGCGTCGCGG TGACCACCGT GGCGGCAAAC
CTGCGCGATC CCGAGGTCGC CACCATCGTG GTCGAGCGAG CCGTCGCTGC GTTCGGGTCG
GTGTCGGTCC TCGTCAACAA TGCTGCGGCG AGCCCGACGT TCGGTCCGAT CGCCCAGATG
GAGCCGGAAG CGATGGACCT CGTCTGGGCG GTCAACGTCC GTGCCCCCGC ATTGCTCGCC
GCTCGGTTCG CGAGCGCGCC TGGTGACGAC AAGGCGATCG TGAACATCGC GAGCGTCGGG
GGGCTCGAGC CCGAGCCCGG CATCGGGCTC TACAACGTCT CCAAGGCGGC GTTGATCCAT
CTCACCCGCC AGCTCGCCAC GGAGCTTGCA CCGGTGCGCG TCAACGCGGT CTCGCCGGGC
CTGGTGCGCA CATCCTTTGC GGCGGTCCTC GTAGATGCGC TCGAGGCGCA GCTGGCTCGC
TCGTTGCCGG CACGGCGGAT CGGTGAGCCC GCCGACGTCG CGGCGGCGGT CGCGTTCCTC
GTCTCCGACG AGGCGCGCTG GATCACGGGG GCCAACCTCG TCGTCGACGG CGGGACGCTG
ACGATCGGTC GGCTCGGGGG GCCGTGA
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| Protein sequence | MHRGAAIITG ATRGIGRSVA ETLGAKGYPI VGVARREEEL ASLEKDLRAG GVAVTTVAAN
LRDPEVATIV VERAVAAFGS VSVLVNNAAA SPTFGPIAQM EPEAMDLVWA VNVRAPALLA
ARFASAPGDD KAIVNIASVG GLEPEPGIGL YNVSKAALIH LTRQLATELA PVRVNAVSPG
LVRTSFAAVL VDALEAQLAR SLPARRIGEP ADVAAAVAFL VSDEARWITG ANLVVDGGTL
TIGRLGGP
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