Gene Afer_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1616 
Symbol 
ID8323707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp1707874 
End bp1708281 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content66% 
IMG OID644952753 
Producthistidine triad (HIT) protein 
Protein accessionYP_003110211 
Protein GI256372387 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTTGTC ATCTCCTTGC CACGAGTGAC CCCTATCTCG TCACGGCGGA CCACGACGTC 
GCCGTCATCT TGGATCGCGC GCCGGTGGCT CCCGGTCACG CGCTCGTCAT CCCGACCGGC 
CACGTCCCCA CCTTCGATGA CGCGAGCCCT GCTCAGTTGG CTTCCGTCAC GGTGACCGCT 
CAACGACTCT CGCGGGGCTT GCGCTCGCAC GGCATCGCGG ACGGCGCGCT GATCCTGACC 
AACGTGGTCG TCTCGCAATC GGTGCCGCAC TGGCACTGTC ACGTGGTGCC TCGACATCGC 
GGCGATGGGC TTCGAGGCTT GCTCTGGCCT CGACGTCGCT ACGGCAGCGA CGATGAGGTC 
ACGCTCTGGC GCACGACCCT GCACGCGCTC GTAGCACCAC AGAGCTAG
 
Protein sequence
MFCHLLATSD PYLVTADHDV AVILDRAPVA PGHALVIPTG HVPTFDDASP AQLASVTVTA 
QRLSRGLRSH GIADGALILT NVVVSQSVPH WHCHVVPRHR GDGLRGLLWP RRRYGSDDEV 
TLWRTTLHAL VAPQS