Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1560 |
Symbol | |
ID | 8323650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 1640896 |
End bp | 1642134 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644952696 |
Product | beta-lactamase |
Protein accession | YP_003110155 |
Protein GI | 256372331 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACCA CGTCGCTCAC GCGAGCCCAT CCGAGCAGCC TCGGCTTCGA CGCGCACGTG CTCGAGCGCC TTCGGCGAAC CCTCGACACC TGGATCGAAA CCCAACGCCT CGCTGGCCTC GCGGTCGCCA TCACTCGCGA CGGTGAGGTC GCCTTCGAGC ACTACACCGG ATGGGCCGAT CGAGCGCGCA ACGTCCCGGT CACGCCGCAG ACGCTCTTTC GGATCTACTC GATGACCAAA CCCATCACCT CGATCGCGGC GCTCCAGCTG GTCGAGGAGG GACGGATCCG CCTCGACGAT CCGATCGCAA CGGTCTTGCC CGCCTTCGCC GAACCACGCG TACTCGTCTC TGGCGGTGCG CCAGGGGGCT ACGCGCCAGC GGTGACGCGC GGGGCGATCG AACCCATTCG GCTCTGGCAT CTGCTCACCC ACACCGCCGG TCTCACCTAC GACTTCCATC GCCAGAGCGC GGTGGACGCG ATGTACCGCA AGCTCCAGCG CACCCTCGAC GGCGCCGACC TTGGAGCCTG GGTCGACGCA CACGCCGAGC TCCCGCTCCT GTTCGACCCG GGCACGCACT GGAACTACTC CATCGCCACC GACGTCGTCG GCCACCTGGT CGCGACGCTG CGAGGCGCAC CGCTCGCCGA CGTCCTCACA ACCTTCGTCC TCTCGCCTCT CGGCATGCAC GACACGACGT TCGAGGTTCC GGCCTCAGAG GCCGATCGCA TCGCCGCGAT CGTCACCCCT GGTGGCGACG GGACGCTCCA TCGCCTCGGG CCCGTGCAGC CGGAGACCCG CGTGGCGCCG ATCGACTCCG GTGGCGGCGG GTTGTTCTCG ACCCTCGAGG ACTACACACG CTTCAGCATC GCACTCGCCC TCGGTGGCCG CCTCGGGGAC GCACGCCTGG TCGGACCGCT CACACTCGAT GCGATGCGAT CCAACCACCT TCCCGGAGGT TCGGACATCC CCACCATGGC GATCGCCAGG CCACAACCCG GCGACCGCCC AGGGACCGGC TTCGGCCTTG GCTTCTCGGT CGTCGATGAT CCGATTGCCT CACACCGACT CGGTCCGCGA GGTTCCTACG GTTGGGGCGG CATGGCCTCG ACGACCTTCT TCGTGTGGCC GGCTCAACGC GTGAGTGTCG TGTTCATGAC ACAGCTTGTG CCGTCGAACA CGTACCCGCT CGCCGAGGAA CTCGAGACGT TCGTCGCAGC AGCGCTCACG CGGCCCTGA
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Protein sequence | MDTTSLTRAH PSSLGFDAHV LERLRRTLDT WIETQRLAGL AVAITRDGEV AFEHYTGWAD RARNVPVTPQ TLFRIYSMTK PITSIAALQL VEEGRIRLDD PIATVLPAFA EPRVLVSGGA PGGYAPAVTR GAIEPIRLWH LLTHTAGLTY DFHRQSAVDA MYRKLQRTLD GADLGAWVDA HAELPLLFDP GTHWNYSIAT DVVGHLVATL RGAPLADVLT TFVLSPLGMH DTTFEVPASE ADRIAAIVTP GGDGTLHRLG PVQPETRVAP IDSGGGGLFS TLEDYTRFSI ALALGGRLGD ARLVGPLTLD AMRSNHLPGG SDIPTMAIAR PQPGDRPGTG FGLGFSVVDD PIASHRLGPR GSYGWGGMAS TTFFVWPAQR VSVVFMTQLV PSNTYPLAEE LETFVAAALT RP
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