Gene Afer_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1535 
Symbol 
ID8323621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1608313 
End bp1608795 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content67% 
IMG OID644952668 
ProductGreA/GreB family elongation factor 
Protein accessionYP_003110131 
Protein GI256372307 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGG TAGAGATCTC ACAGGCGACG TACGACGCCC TGGTTCAGGA GCTCGAGGAG 
CTGACAACCC AGGGGCGCAT CGAGATCGCC AAGGCGATCG AGGCTGCCCG TGCGCTCGGC 
GATCTCAGCG AGAACGGCGA CTACCACGCC GCGAAGGACG CCCAGGGCAA GATGGAGGCG 
CGGATACGCC AGATCCAGCA GATCCTCCAG AGCGCTCGGG TGGTGTCGGC GGACCTTCCG 
ACGGACGAGG TGCGCCCGGG TGTGGTCGTG GGCCTTCGCT ATGAGGGTGA AGACGATGTC 
GAGCACTATC TCGTCGGCTC CATCGAGGAG CGGCACCCGG GGCTTGAGGT TGTCTCGCCG 
ACCTCGCCAC TCGGTGAGGC ACTGCTCGGG GCGCGCGTCG GTGCCTGGGT GGAGTACGAG 
GCGCCACGCG GTACCCTGAA GGTCCAGGTC GTCGAGATCG GGCCGCTCAA GACCGCTCGC 
TAG
 
Protein sequence
MSEVEISQAT YDALVQELEE LTTQGRIEIA KAIEAARALG DLSENGDYHA AKDAQGKMEA 
RIRQIQQILQ SARVVSADLP TDEVRPGVVV GLRYEGEDDV EHYLVGSIEE RHPGLEVVSP 
TSPLGEALLG ARVGAWVEYE APRGTLKVQV VEIGPLKTAR