| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1530 |
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| Symbol | |
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| ID | 8323616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1602182 |
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| End bp | 1603765 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952663 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_003110126 |
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| Protein GI | 256372302 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAGAG TGTTGGTGAC GGAGACGATC GCTGAGGAGG GCCTCCAGCT GCTCTCTGAC
GCGGGTCACG AGGTGGTGGT CCGCACCGGG CTCGACCACG ATGGCCTCCT CGAGGCGGTG
GCCGACGCCG ACGCGCTGAT CATTCGCTCT GCGACCAAGG TCACCGCCGA CGTGCTCGAG
GCGGCTCACC ACCTCGTGGT GGTAGGTCGT GCCGGCATCG GACTCGACAA CGTCGACGTC
GAGACGGCGA CCAAGCGCGG GGTGATGGTG GTCAACGCCC CGCAGTCGAA CATCGTGTCG
GCCGCCGAGC ACACGCTGGC GCTCCTGCTG GCGCTGGCGA GACACGTCCC GCAGGCCCAC
GCGTCGGTGC AGCGCGGTGA GTGGCGGCGC AGCGCCTTTC AGGGTGTCGA GCTCTACGGC
AAGACGCTCG GCATCATCGG CCTGGGGCGG ATCGGGGCGT TGGTCGCCCA GCGCGCCAAC
GCGTTCGGCA TGCGGCTCGT TGCCTATGAC CCCTACATCT CGCAGGAGCG CGCGCGCAAG
ATGGGCGTGA CCCTGCTGGA CCTCGACGAA CTCATGGCGA CGTCCGACAT CGTCACCATC
CATCTGCCGA AGTCGAAGGA GACCGTGGGG CTCGTCGGCG CGGCGCTGCT TGCCAAGGCC
AAGCCCGGCA TCCGGATCGT GAACGCTTCT CGTGGAGGGA TCATCGACGA GGCAGCGCTC
GCCGAGGCCA TCGCCCGTGG GCACGTCGCG GGCGCAGCAC TCGACGTGTT CGCCGAGGAG
CCGCCGACCA ACTCGCCGAT CGTGGGGCTC GATCAGGTCG TGCTCACCCC GCATCTCGGA
GCCTCCACCG CAGAGGCGCA GTCCAAGGCC GGCGTCACGA TCGCCGAACA GGTCCTGCTC
GCGCTCGCGA ACGAGTTCGT CCCCTTCGCG GTCAACGTCA ATGCGGGCGA AGCATCCGAG
CTCGTTCGCT CGTTCCTCCC GCTCGCCGAG GCGCTCGGTG TATTGCTCGG GGCGATCGAG
GGCAAGCTTC CCGAGCAGCT CGAGATCGCC TACGAGGGCG AGTTGGCCTC GGAGGACACG
CGACTCGCGT CGCTCGCTGT CTTGCGTGGG ATCCTCTCCG GTGCGGTCGA AGAGCCCGTG
TCCTACGTCA ACGCGCCGCA GCTCGCGGCC GAACGTGGGC TGTCGGTACG AGAGTCGACG
CAAGTCGCCT CGGCGAACTA TCACTCTCTC CTCGTCGTGC GCTCTGGTGC GCACGTGGTG
GGGGGGACGC TCGCGGGTCA GCGGGCGAGC GAGCCACGGG TCGTCCTTGT CGATGGCCAC
TGGGTCGAGG TTCCTCCGTC GCGATGGATG CTGGTGGTTC GCAATGTCGA CCGACCTGGG
ATGGTTGGGG TCGTGGGCTC GCTCCTCGGG CAGGCCGGTC GCTCCATCGA CGCCATGGCG
GTCTCGCCGC GCACCGACGA TGGCACTGCG CTGATGGTGC TCGGCGTCGA CGGCCCGATC
CCGGACGAGG TGTTGACCGA GCTGGATGCC ACCGACGGCA TCATTTATGC CCGGACGGTC
ACGTGTGCCG TCGCTGGCCT CTAG
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| Protein sequence | MARVLVTETI AEEGLQLLSD AGHEVVVRTG LDHDGLLEAV ADADALIIRS ATKVTADVLE
AAHHLVVVGR AGIGLDNVDV ETATKRGVMV VNAPQSNIVS AAEHTLALLL ALARHVPQAH
ASVQRGEWRR SAFQGVELYG KTLGIIGLGR IGALVAQRAN AFGMRLVAYD PYISQERARK
MGVTLLDLDE LMATSDIVTI HLPKSKETVG LVGAALLAKA KPGIRIVNAS RGGIIDEAAL
AEAIARGHVA GAALDVFAEE PPTNSPIVGL DQVVLTPHLG ASTAEAQSKA GVTIAEQVLL
ALANEFVPFA VNVNAGEASE LVRSFLPLAE ALGVLLGAIE GKLPEQLEIA YEGELASEDT
RLASLAVLRG ILSGAVEEPV SYVNAPQLAA ERGLSVREST QVASANYHSL LVVRSGAHVV
GGTLAGQRAS EPRVVLVDGH WVEVPPSRWM LVVRNVDRPG MVGVVGSLLG QAGRSIDAMA
VSPRTDDGTA LMVLGVDGPI PDEVLTELDA TDGIIYARTV TCAVAGL
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