| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1528 |
|---|
| Symbol | |
|---|
| ID | 8323613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 1598539 |
|---|
| End bp | 1599945 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644952660 |
|---|
| Product | glutamyl-tRNA synthetase |
|---|
| Protein accession | YP_003110124 |
|---|
| Protein GI | 256372300 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.819487 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCTG AGCGCGTACG CTTCGCGCCA TCACCGACGG GCATGTTCCA CGTCGGGTCA
GCACGCACTG CCCTGTACAA CTGGCTCATC GCGCGCCAGA GCGGAGGTAC GTTCATCCTG
CGGATCGACG ACACCGACGA GGAGCGCAAT CGCGAGGCCT GGGTCGACGG CATCCTGCGC
GCCATGGAGT GGCTCGGCCT CGACTGGGAC GAAGGTCCGC TCCGGCAGTC GTCGAGGGCC
GAGCGCTACC GTGCCGTCGC CGAACGGCTG GTGAGCGAGG GGCACGCCTA TTGGTGCGAT
TGCACGCGAG AGCGCGTCGA GGCCCGCAAG CAACCCGGCG AAGCGCCAGG CTACGATGGC
TTCTGCCGTC ACCGAGGGCT CGGGCCCGGC CCGGGGCGCG CGCTCCGCTT TCGTGTCCCC
GACCATGACG TGGTCGTGAC GGACCTCGTC CGAGGGGAGG TGCGTTTCCC GGCCGGCTCC
ATCGAGGACT TCGTCATCGT CAAGTCCACC GGTCAGCCGC TCTACGTCCT CGCCAACGTC
GTCGACGACA TCGACCTCGC CATCACGCTC GTCCTGCGCG CGGAGGAGCA CCTCCCCACG
ACGCCGAAGG CGGTGTTGCT GCACGAAGCG CTGGCAGCGC CGCCGCCGCG CTTCGCCCAC
CTCTCTTTTC TCGTGAACGA CCAGCGTCGC AAGCTCTCCA AGCGCCGCGA TCGAGTTGCG
GTGGAGGACT ACCGTCAGAT GGGCATCCTC CCCTGGGCGC TGCTCAACTA CGTGGCGCTC
CTCGGATGGA GCCCAGGCAC CGACGAGGAG TTCTTCAGCC GTGAGGAGCT CATCGCTCGC
TTCGACCTCG CTCGAGTCCA GCACTCTCCC GCCTTCTTCG ACGAGCGCAA ACTCCTGGCG
TTCAATCAGC ACTACCTCCA GGCACTGCCA CTTGCCGAGC TCCTCGAGCA AGGCCACGAC
CACTTCGCCT CGATCGGCGC GTTCGCCACC CAACAGGCAA CCGAGCTGCT CACTCAGCTC
CTTCCACTCG TCGTGCCTCG AGCACGAACA CTGTCCGAGG CAGCAGCGAT GAGTGCCTTT
CTCTTTGCGG ACCCACCCAT CGCCCCGAAC GAGATCGAGG CACTCCGGTC GGAGTCCGCG
TCGTGGCTCG GGGCGATCGC CGCACGTCTC GGGGAGCTCG AGCGCTTCGA TGCCCCCTCG
ATCGAAGCAG CCCTTCGGGC GCTCGCCGAC GAGCTCGGGA CGTCGCTGCG CCATCTCCAA
GCACCGCTGC GCGTCGCCGT CACCGGCAGT CGTGTCGGAC CCCCGCTGTT CGAGTCGCTC
GCACTCGTCG GGCCCGAGGC CACGCTACGA CGCATCCATG CTCTCCGCGT GACCCTCGAG
GACCGGACCC AAGCACACGC CGGGTAA
|
|---|
| Protein sequence | MAPERVRFAP SPTGMFHVGS ARTALYNWLI ARQSGGTFIL RIDDTDEERN REAWVDGILR
AMEWLGLDWD EGPLRQSSRA ERYRAVAERL VSEGHAYWCD CTRERVEARK QPGEAPGYDG
FCRHRGLGPG PGRALRFRVP DHDVVVTDLV RGEVRFPAGS IEDFVIVKST GQPLYVLANV
VDDIDLAITL VLRAEEHLPT TPKAVLLHEA LAAPPPRFAH LSFLVNDQRR KLSKRRDRVA
VEDYRQMGIL PWALLNYVAL LGWSPGTDEE FFSREELIAR FDLARVQHSP AFFDERKLLA
FNQHYLQALP LAELLEQGHD HFASIGAFAT QQATELLTQL LPLVVPRART LSEAAAMSAF
LFADPPIAPN EIEALRSESA SWLGAIAARL GELERFDAPS IEAALRALAD ELGTSLRHLQ
APLRVAVTGS RVGPPLFESL ALVGPEATLR RIHALRVTLE DRTQAHAG
|
|---|
| |