| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1431 |
|---|
| Symbol | |
|---|
| ID | 8323514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1496455 |
|---|
| End bp | 1497657 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644952563 |
|---|
| Product | Alcohol dehydrogenase zinc-binding domain protein |
|---|
| Protein accession | YP_003110028 |
|---|
| Protein GI | 256372204 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.115342 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGCGT TGCAGGTCGA ACGTCGGCCA GCGCGGTTCG CGGCGGCTCG TCTGCTCGCT
GGATCCTCGA CGCGACGGGC GATCGAGAGC GGCCCACTCG CGTTGGTTGA CGTCGACCCG
CCGGAGCTTC CTGGGCCCAA CTGGGTGCGC GTACGGCCCC GGCTTGCCGG GATCTGTGGG
TCAGACCTCG CATCGGTGTT CTTCGAGACG TCGCGCTACT TCGAGCCTCT CGTCTCGCTG
CCCTTCATCC CGGGGCACGA AGTCGTCGTT GACGCGGAGG GTCGATCGGG TCGGTGGGTC
GTCGAGCCGG CGTTGACGTG TGCCGTGCGG GGCGTGCCGC TGTGTGACGC GTGCCAACGA
GGTGAAACGC AGCGCTGTGC GTCGATCGCG GTCGGCGATC TCGAGCCGGG CATCCAGACC
GGCTACTGTG CCTCGACCGG GGGTGGTTGG GCGAGCGAGT TCGTGGCGCA CGAGGCCACG
TTGCACGCGG TTCCTGACGA GGTCGACGAT GCGGACGCCG TGATGGTCGA GCCACTGGCG
TGTGGTCTCC ATACCGTCTT GAGCGTCGGT CGGCGTGACG GGCATGTGGC GGTGATCGGT
GCTGGCACCG TGGGCCTTGT CGCGACGGCC GTCGCCGCTC GGCTGCAGAG CTTTGCCAGC
GTGACGAGCG TCGCACGCTA CCCGCTCCAA CGTGAGCTCG CGAGCGCGTT CGGTGCGGAT
CGTGTCGTGA CTGAGCGCGA GCTACCAGAG CGGGCACGTC GTCTGCGAGG AACACTGCGA
GCAGGGCGCT TCCTCGGCGA CGGTTTCGAT GCCGTCATCG ATGCGGTGGG CTCTGCCAGT
TCGATCCAGC TCGCGATCGA GTCGGTCCGA CCGGGTGGCG AGGTGATCGT GGCGGGCATG
CCGTCGCCCC AACGTCTCGA TCTCGCACCC TTGTGGCACC GGGAGGTGCG ACTGATCGGC
GCATACGCCT ACGGCACCGA GGTGCTCGAA CCCGACATCG CCCAGTCCTT GGGACGAGTC
GCCGGTCCGG TACGCACGTT CGATCTGGCG ATGGGTCTCG CCGCGGACCT TGGCCTCGGA
CGACTCGTGA CCCATCGCTA TGGCCTGCGC GACTACGTCA CGGCCATCGC GAAGGCTCGG
GAAGGGGGTC GCGCCGATGC AATCAAGGTC GTCTTCGATC TTCACCAAAG GAAGGCACGC
TAA
|
|---|
| Protein sequence | MRALQVERRP ARFAAARLLA GSSTRRAIES GPLALVDVDP PELPGPNWVR VRPRLAGICG
SDLASVFFET SRYFEPLVSL PFIPGHEVVV DAEGRSGRWV VEPALTCAVR GVPLCDACQR
GETQRCASIA VGDLEPGIQT GYCASTGGGW ASEFVAHEAT LHAVPDEVDD ADAVMVEPLA
CGLHTVLSVG RRDGHVAVIG AGTVGLVATA VAARLQSFAS VTSVARYPLQ RELASAFGAD
RVVTERELPE RARRLRGTLR AGRFLGDGFD AVIDAVGSAS SIQLAIESVR PGGEVIVAGM
PSPQRLDLAP LWHREVRLIG AYAYGTEVLE PDIAQSLGRV AGPVRTFDLA MGLAADLGLG
RLVTHRYGLR DYVTAIAKAR EGGRADAIKV VFDLHQRKAR
|
|---|
| |