| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1344 |
|---|
| Symbol | |
|---|
| ID | 8323425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1399614 |
|---|
| End bp | 1400549 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644952476 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_003109943 |
|---|
| Protein GI | 256372119 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCTA GCTCGTCTAG CTCGTCGTCA TGGACGCCGC GTCGAGACGG CGTACTCGAG
GAGCTGGCCC CGGGGGTGTT CGCCTACCTC CAACCCGATG GCTCCTGGTT CCTGTCGAAC
GCAGGAATCG TGCTCGCTGG GGAGCGTAGC GTCCACGTCG ATACCACCGC AACCGTGCGT
CGTACCCAGG CGCTCCTCGA GGCAGCTCGA CGCGTCGGAG CACCATCGCG CCGCCTGCTG
GTGGCGACGC ACCACCATGG CGATCACACG AACGGCACCG CAACCCTCGA TCCTGAGGTG
ATGATCGCTC AGCGCTCGGT GCCCGAGGAG CTCGCGACCG GGATCGTCGT GCCGCCGCCG
GGCGTGTTCA CGCCGGTGGA GTGGGGGGAG ATCGACGTGC GCATGCCGGA CGTGCTCTTC
GACGACGGTC TTACCCTGCG GTTCGACGAT CACGAGATCG AGGTGAGGGC GGCGGGTCGG
CCTGCGCACA CACGAGGCGA CGCGGTGGTC TGGTTGCCCG AGAGCCGCGT GCTCTTCGCT
GGCGACCTCC TGTTCGTCGG CGGCACCCCC TTTGCGCTGG GCGGGTCGGT GCAGGGCTGG
ATCGAGGTCA TCGCGTGGCT CCGAACCTTC GACGCCGACG TCATCGTGCC GGGGCACGGC
CCACTTGCGA CGACGGCTGA TCTCGACGCC GTCGAGCGCT ATCTCCGCTT CGTGTGGCAC
CTCGCGCACG AAGCACACGA GGCCGGGGTG CCCCCGCTCG AGGCGGCGCG CTCCGTCGAT
CTCGGCGAGT TCGCTGCGTG GTTGGACCCA GAGCGCCTCG TCGGCAACGT GCATCGAGCG
ATCGCCGAGC TCGATGGGCG CGAGGTCGAT GTGCTCGCTG CCTTCGGCGA TATGATCGCC
TACAACGGCG GACGCCCGCT GACCTGCCAC GCCTGA
|
|---|
| Protein sequence | MSSSSSSSSS WTPRRDGVLE ELAPGVFAYL QPDGSWFLSN AGIVLAGERS VHVDTTATVR
RTQALLEAAR RVGAPSRRLL VATHHHGDHT NGTATLDPEV MIAQRSVPEE LATGIVVPPP
GVFTPVEWGE IDVRMPDVLF DDGLTLRFDD HEIEVRAAGR PAHTRGDAVV WLPESRVLFA
GDLLFVGGTP FALGGSVQGW IEVIAWLRTF DADVIVPGHG PLATTADLDA VERYLRFVWH
LAHEAHEAGV PPLEAARSVD LGEFAAWLDP ERLVGNVHRA IAELDGREVD VLAAFGDMIA
YNGGRPLTCH A
|
|---|
| |