Gene Afer_1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1326 
Symbol 
ID8323405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1379635 
End bp1380429 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content69% 
IMG OID644952456 
ProductGntR domain protein 
Protein accessionYP_003109925 
Protein GI256372101 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCCGAG AGCATCAGGG GGCGGTTCCT CCCATCGCCG ACGTCCGGGG CCACCTCGAT 
CTCTCGCGAA TCCTGCGACC TCAGAGCGCA CCAGACCAGA TCGCCGATCG GATCCTCGCC
GCCATCGCCG TCGGCATTCT CTACCCCGGC GACCGGTTGC CGCCCGAACG CGAGCTCACC
TCGCGCCTCG GCGTCTCGCG GGCCACGCTG CGCGAAGCCA TCGGCCGCCT CGCCGCCTTC
GGTGTTCTCG AGACCCGACG AGGGCGCGGG GGCGGGACCT TCGTGACTGG CGTGCATCGC
GAGAGCGAGG AACGCGCAGC GCTCGAACGA GCCCTCGCGC CGATCAAGTC AACGCTCGAG
GCACTCCTCG ATTACCGCAA CGTCGTCGAG CAGGCGCTGG CCCGTGCCGC TGCCGAGCGG
CGCACCGATG ACGATGTGGC TGCGATGCGC AGCGCCCTCG CCGCGTACGA GGACGCAGCG
AGCGCCCAGG CTTCTCGCGC AGCCGATCGC GCGCTGCACG AGGCCATCGC TCGAGCGACC
CACAACCCTC TCCTCGAACG CGCCAACGCA GAACTGTTCG AGGGGACGAA CCTGGGCTTT
GACTCCCATC CGTACTCGCC ACAGCTCCAT GCGAAGGCTC GCCAGCAACA TCGCGCCATC
GTGGACGCGA TCGCACGACG CGACGTCATC GCGGCGGGCA CCCTGACACA CGAGCACTTC
CTCGTGACCG GAACGTACCC GCTCATCGAT CCGGACGAGC CCGATCACAC CGCTGCGCGA
GCCTCGACGG CCTGA
 
Protein sequence
MGREHQGAVP PIADVRGHLD LSRILRPQSA PDQIADRILA AIAVGILYPG DRLPPERELT 
SRLGVSRATL REAIGRLAAF GVLETRRGRG GGTFVTGVHR ESEERAALER ALAPIKSTLE
ALLDYRNVVE QALARAAAER RTDDDVAAMR SALAAYEDAA SAQASRAADR ALHEAIARAT
HNPLLERANA ELFEGTNLGF DSHPYSPQLH AKARQQHRAI VDAIARRDVI AAGTLTHEHF
LVTGTYPLID PDEPDHTAAR ASTA