| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1311 |
|---|
| Symbol | |
|---|
| ID | 8323387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1362271 |
|---|
| End bp | 1363677 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644952442 |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_003109914 |
|---|
| Protein GI | 256372090 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.141465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCACAA CCTACGTGAG GCGTGAACTG CGTCGGCGCA GTCGACAGGC CGTCCTCGTG
TCGGCCGGGC TTGCTGTAGG AATCGGCCTC GTTGTGACGG TCTCGGCTGC AACGGCTGGC
GTGCGTTCGG CCGATGGCGA GGTGCTCCAC AGCTTGTACG GCGTCGGTAC GGACATGATC
GTCTCGAAGA CCGCAACGCC CGGGAGCTTC GGGGGTGAGC GCTTTGGCTT TGGATCGGGA
GCCTTCAACC CCCGAGCTGC GAGGAGTGCG CGTCTCGCAG GTAACCGATT GCATCTGACT
CGTGGTCAGG CCGCGTTGCC GGCCGCTGAC GTCTCGAAGG TTGCTCGGTT GCGCGGCGTC
GCGGGTGCGA CCGGCGGTCT CCAGCTCACG GACACGTCGT TCTCGGGGAC TGTTCCGACC
TTTGGCAGTG GTGGCGGCGG TTCGTTCAGT ATCAACTCCT TCAGCGTGGA TGGAGTCCAG
ATCTCGTCGA GCGGCGTCGG CCCTCTCACT CCTTCCGAGG TCACGAAGGG CGCGTACTTC
ACCGCGGCGG ACGCCACCAA GGACGTCGCC ATCGTGAGCA GCGGGTATGC GACGTCCCAG
CAGCTCTCCG TCGGCTCGAC CCTCGACGTC GGAGGCGCGT CGGTGAAGGT CATCGGCATC
GCGACGACGC CAACGAGCAC GGCCGACGTG TTCCTGCCGC TCGCCACCGC GCAGCAGCTC
TCGGGCGAGG CGGGCAACAT CTCGACGATC TACGTGAGCG CGCAGAGCGC GAGCAACGTC
AGCACGCTCG CAAGCGAGGT GGCCAAGATC CTCCCAGGTG TGACGGTGTC GACCTCGGCG
AGTCTTGCCA GCGACGTCTC GGGGTCGCTG GCCAGTACGA GCAGTCTGCT CTCAAGTCTC
GGGAAGTGGA TCTCCGTCGC GGCGCTGGTG ATGGCGGTGC TGGTCGCAGG GTTGTTGATG
ATGGCTGCCG TGTCGAGGCG CACCCGTGAG TTCGGCACCT TGAAGGCGAT TGGGTGGCGA
ACGCGCCGGA TCGTTGCCCA GGTCATGAGC GAAGGACTCG TCCTTGGCGT CGGTGGCGGC
ATCGCTGGCC TTGTTCTCGG CATCGCTGGG GCCGAAGCTC TCTCGGCGGC GTCACCGACA
CTTCGAGCGA CCGTCGGTCG ATCGGTGGCC TTCGGTGGTG GTTTTGGCGG TGGTGGCTTC
GGCGGCGGCT TCGCGGGTGT GCGAGCTGGG CTGCGCCAGG CAGCGGGCGT ACGAACCGTC
CTCGTGCATC TGAGTGCCCC CTTGCAGGCT GACACCATTG CACTTGCGGT CGGCCTGGCC
ATCATCGGCG GGCTGGTGGC CGGTGGCCTT GGTGCCTGGC GAGCTTCCTC GCTCCGGCCG
GCGGACGCGC TTCGGAGTGT GCAGTAA
|
|---|
| Protein sequence | MITTYVRREL RRRSRQAVLV SAGLAVGIGL VVTVSAATAG VRSADGEVLH SLYGVGTDMI
VSKTATPGSF GGERFGFGSG AFNPRAARSA RLAGNRLHLT RGQAALPAAD VSKVARLRGV
AGATGGLQLT DTSFSGTVPT FGSGGGGSFS INSFSVDGVQ ISSSGVGPLT PSEVTKGAYF
TAADATKDVA IVSSGYATSQ QLSVGSTLDV GGASVKVIGI ATTPTSTADV FLPLATAQQL
SGEAGNISTI YVSAQSASNV STLASEVAKI LPGVTVSTSA SLASDVSGSL ASTSSLLSSL
GKWISVAALV MAVLVAGLLM MAAVSRRTRE FGTLKAIGWR TRRIVAQVMS EGLVLGVGGG
IAGLVLGIAG AEALSAASPT LRATVGRSVA FGGGFGGGGF GGGFAGVRAG LRQAAGVRTV
LVHLSAPLQA DTIALAVGLA IIGGLVAGGL GAWRASSLRP ADALRSVQ
|
|---|
| |