Gene Afer_1309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1309 
Symbol 
ID8323385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1360801 
End bp1361451 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content71% 
IMG OID644952440 
Productpyridoxamine 5'-phosphate oxidase-related, FMN- binding 
Protein accessionYP_003109912 
Protein GI256372088 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.306682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTACCG ACCTCACCCG TGAACGCGAT CGGCGCTCCG ACGATCGAGC CGCCCTCGAT 
CAGCTCCTCG ACGAGGAGCT GATCGCACAC GTTGCCGTCG TTCGCGACCA CGGACCGGTC 
GTGGTGCCGA CGGCGTTCGC TCGCGACGGT GACGCGCTCG TGCTCCACGG GTCGGTCGGG 
TCGGGGTGGA TGCGACATGC CAAGGCGGGC GGGGCGCTCG CGATCAGTGT CGCGCACCTC 
GACGGGCTCA TCGTGGCGCG CAGTGCGTTC CACTCGAGCC TTCGCTACCG TTCCGCGGTG 
CTCTTCGGTA CGGGGACGGT GCTCGAGGGC AAGGAGCGAG AGCGCGCGCT CGATCGGATC 
ACCGACAAGC TCCTCCCCGG TCGAACGGCG GAAGTTCGTC GTCCCCTCCG TCGAGAGCTC 
CTCGCCACCA TGGTGCTCCG CGTGCCGATC GTGGAGTGGT CGCTCAAGGT GTCCGCTGGT 
TGGCCGAGCG ACGAGCCCGA TGACCTCACG GGCAACGCAT GGGCAGGGGT GATCCACGTC 
GGGGCGCCGA CGCGCTGGGC GGAGCCCGCC CCGGATCTCG CGTTCGGTGT CGCGGTGCCC 
GTGTCGGTCC GTCGCCTGGT CGCTCGCGAC GACGGGCCCG GCCTCGCCTG A
 
Protein sequence
MRTDLTRERD RRSDDRAALD QLLDEELIAH VAVVRDHGPV VVPTAFARDG DALVLHGSVG 
SGWMRHAKAG GALAISVAHL DGLIVARSAF HSSLRYRSAV LFGTGTVLEG KERERALDRI 
TDKLLPGRTA EVRRPLRREL LATMVLRVPI VEWSLKVSAG WPSDEPDDLT GNAWAGVIHV 
GAPTRWAEPA PDLAFGVAVP VSVRRLVARD DGPGLA