| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1294 |
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| Symbol | |
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| ID | 8323370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1347078 |
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| End bp | 1348088 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952425 |
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| Product | heat-inducible transcription repressor HrcA |
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| Protein accession | YP_003109897 |
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| Protein GI | 256372073 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.190693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTCGAAG AGCAGCTGAG TCCGCGCCAA GAAGCCATCT TGATGGCGGT CGTGGCCGAG
TACGTCCGGA CCGGTGTCCC GGTCGGGAGC AAGCACGTGC TCGATGTGAC CCACCTCGGT
CTCTCGCCGG CGTCCGTGCG CGCGCAGATG GCCCAGCTCG AGCAGGAGGG CTTCCTGGCA
CAGCCCCACG TCTCGTCGGG GCGGATCCCA CTCGTGAAGG GCTACCGATA CTTCGTCGAT
CGTCTCATGC GTGTCGATAC GACGCTCATC GAGCGGCTGC GCCGAGAGAT TGTGGGTCGC
CTGCGTGCTG CCCGTGGTGA GTGGGACGAC GTCCTCGAGC TGACGCTGGA TCTCGCGGTC
GAGCACTCGC AGTACACGGC CGTGATCGCG GTGTGGTCCT CGGAGGTCGA GGTGGTGCGT
GCCGTCCATC TCGTGCCCTT GGATCCACCG ACGATCCTTG GGGTCGTCGT CGGCTCGCGG
GGTGCGCTCG AGCGTGCGAT GTTCGAGATC GAGCCGACCC CGCCGGAGTC GGTCGTCGTC
GCGGCAGGGA ACTTCCTCGC GTCTCGGTTG CGCGGGCACC GAATGTCGGA GCGACTAGCC
GTCCTCCCGA GCGGGAATGC GGAGATGGAC GCGGTCGTCT TCGCGGCCCT CGCCGCGATC
GACGAGAGCC GCGTGCGCGA GCGGCCGGAA CTTCGGGTTC GAGAGGTCGC CAAGACCGCG
AGCGCACTCG ATCAGCTCTC GAAGGTCGCC GGTGTGCTCG AAACGATCGA GCAACGACTG
TCGCTCGTCG AGGTGCTGCG CCGCCTCATC GACGAAGGTG AGCCGGTCTC GATCGGGAAC
GAGAGCGGGG TCGCCGCTCT GGACGACTGC TCCCTCGTCG TCGCTCCGTG CGAGGTCGAC
GGGACCATCG TCGGGTCGAT CGGTCTGTTG GGGCCGGTGC GCATGGACTA CGGTGGGGCG
TCGGTGGTGG TCGAGGCGCT GCGCGAGGGC GTGGCAGAGG CGGTCGGGTA A
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| Protein sequence | MVEEQLSPRQ EAILMAVVAE YVRTGVPVGS KHVLDVTHLG LSPASVRAQM AQLEQEGFLA
QPHVSSGRIP LVKGYRYFVD RLMRVDTTLI ERLRREIVGR LRAARGEWDD VLELTLDLAV
EHSQYTAVIA VWSSEVEVVR AVHLVPLDPP TILGVVVGSR GALERAMFEI EPTPPESVVV
AAGNFLASRL RGHRMSERLA VLPSGNAEMD AVVFAALAAI DESRVRERPE LRVREVAKTA
SALDQLSKVA GVLETIEQRL SLVEVLRRLI DEGEPVSIGN ESGVAALDDC SLVVAPCEVD
GTIVGSIGLL GPVRMDYGGA SVVVEALREG VAEAVG
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