Gene Afer_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1291 
Symbol 
ID8323367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1344563 
End bp1345147 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content68% 
IMG OID644952422 
Producthelix-turn-helix domain protein 
Protein accessionYP_003109894 
Protein GI256372070 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0991344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGCG CAGAGCGCGC GTATGCACGT GAGGTCGGTC GCCGCTTGCG GCTGGTGCGC 
AAGCAGCAGC GCTACAGCCT CCAGGCGGTC GAGGCGCTCT CGGCCAAGGA GTTCAAGGCC 
TCGGTGCTCG GCGCCTACGA GCGGGGGGAA AGGTCCATTT CGGTGCCGCG GCTGCGGCGC 
TTGGCAGCGT TCTATCGGGT CGACGTCGAG CAGCTGCTCC CGAGGCCGAC GAGTGAGCTG 
ACGCCAGCGG TCAGCACCAC GGAGCGTGCC GCGCGGATCC TCGACGACGA TCGCGTCACC 
ATCGATCTCG CGGAGATGGA GCGGGCGGCA TCGGTGGCGG CGCCGACGAC CGAGAAGTGC 
ACCATCGATC TCCAGCGGCT GCGGAGCCTC GAGGGGCCCG AGCGTGAGCT CCTCGAGCGC 
TACCTCGGCA TGATCCAGGT GCAACGCCAG GACTTCAACG GTCGCGTCAT GACGGTGCGC 
CGCGAGGATC TGCGGATCAT CGGTGCACTG CTCGGCTTGA GTCTCGAGGG CATGATCGAG 
CACATCGACC GCTTGGGTCT GAGGGCCCTG CCGGAGCCAC GCTGA
 
Protein sequence
MDSAERAYAR EVGRRLRLVR KQQRYSLQAV EALSAKEFKA SVLGAYERGE RSISVPRLRR 
LAAFYRVDVE QLLPRPTSEL TPAVSTTERA ARILDDDRVT IDLAEMERAA SVAAPTTEKC 
TIDLQRLRSL EGPERELLER YLGMIQVQRQ DFNGRVMTVR REDLRIIGAL LGLSLEGMIE 
HIDRLGLRAL PEPR