| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1191 |
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| Symbol | |
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| ID | 8323265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1243187 |
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| End bp | 1244839 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644952322 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_003109796 |
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| Protein GI | 256371972 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.138863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGC GGCGCTTCGC CGAACTTGCC GCCATCGCGG GTGAGGTTCT CGCCCGCCCG
ACGACCGACA CGGTCCTCGA TCGCGCGCTG TGTGCAGCCA TTGCTCCGTT GACGTCGTTC
GCCAGTGCTG GGCTCGCGAG TCTCGAGGGC GATGGGTACT TCCGTGTGAC CCACGTCGCG
GGTCGGTTGA CCTCGGCTCG GGAGCTCCGG GAGATCGCGC TCGCACGCTC CGATCTCGAT
CGCCTCGTTG CGGTGGCGCG GCGCATCGGT AGCCTCCACG TCGTCGACGG AGACCACCCG
TTGCTCGACG AGCTGCTCGC CAAGGCGGCC ATCCGCGAGA CGGAGTCGCT CGTCGAGGGG
TGGAACCCGG CAACGCTCAC CTTTGAACTC GTGGAGTCGT GGGAGCAAGA GGTGGGCGCC
ATCTTGTTCC TCGACCAGCC GGTGAGCCTC GGAGGTCTCG ACGCCGAGGA AGTCGGGTAC
CTGGACGTGC TCGCACAGCT GGTCGGGCTC GCCCTCGTCC AGGAGCATCT GCGTTCGCGC
GTCTCGGCCC AGGTCCGCAT CCTCGAGGCC GAGCGAGCTC GACTCGCAGG GCTCCTCGCG
GCCTCGGGAG ACGTCCAGCG GCGCACGGCG CTCCTCGAGG TGCTCCAGAC CGCCGCGGAT
GCCGTCACGA CGGCAGGTGG CTTCGCGAGG GCCGCGATCT ACCTGCGCGA AGGCGATTCG
CTTGTCCTCG CGGTGACGAG TGGCGTCGAT CCCGTCGAGG CGGAGCGCCT GCATACCGAG
GGTCCCATCC CACTCTCGCT GTTCGCCGCG GTCATGGCGC CGCAGATGCG CATCTCTCGG
TCGTACCTGT TCCGGCATCG CGCCTATCCG CTGCACCCCG ACCTCGCTCG CCGCATGTCG
GTCCCGGTAG CCGAGCACGT CGCCGACGAC GACGCCTGGC AGCCCGAGGA TACGCTGTCG
ATCCCACTTC TCGAGGACGA GCGGCTCCTC GGAGTGATCT CGGTCGACAA CCCGGTGGAC
GGTCGCTATC CGGACCTCGG CCAGATCCAG GCACTCGAGT TCTTCGCCGA CCAGGCCGCG
ATCGCTGTCG GGCAGGTTCG CGCAACTGAG GAGTTGCGCC GCTACGCGGA GACGGATGCC
CTGACCGCGC TCGCCAACCG TCGAACCTTC GAGGCGTCCG GCGCAGAGGC GCTCCATGAC
GCTCAGGTCG AGGGCCGTGC GGTCGCGGTG GTCTTCGTCG ATCTCGACCA CTTCAAGGCC
CTCAACGACG AGTACGGCCA CCTCGCCGGT GACCTTGCCC TCCGCGCCTC GGCGGAGGCC
CTGCGTTCGT GCCTGCGAGC GCGCGACTTG GTCGCGCGCT GGGGAGGCGA GGAGTTCGTG
GCGCTCGTGA CCGATGTCGA ACTCGAGTGG GCTCGCCAGC TTGGCGAGGC GATCCGAGCA
TCGATCGCCT CGAGCGTTCG CGCCGAGGTC GGTGTCGAGG CGAGTGCCTC GGTGGGCGTC
GCGTTGGCGG AGTCGGCTGA GACGGACGCG CCGGATCTTC GGGCGCTGCT CGCAGCCGCC
GACGTCGCGC TCTATCTGGC CAAGCAGCGG GGCCGCGACC GTTCGGAGGT CGTCGTGCGG
CGACAGGACG GCACCGTTCG CCACGTCCCG TAG
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| Protein sequence | MTARRFAELA AIAGEVLARP TTDTVLDRAL CAAIAPLTSF ASAGLASLEG DGYFRVTHVA
GRLTSARELR EIALARSDLD RLVAVARRIG SLHVVDGDHP LLDELLAKAA IRETESLVEG
WNPATLTFEL VESWEQEVGA ILFLDQPVSL GGLDAEEVGY LDVLAQLVGL ALVQEHLRSR
VSAQVRILEA ERARLAGLLA ASGDVQRRTA LLEVLQTAAD AVTTAGGFAR AAIYLREGDS
LVLAVTSGVD PVEAERLHTE GPIPLSLFAA VMAPQMRISR SYLFRHRAYP LHPDLARRMS
VPVAEHVADD DAWQPEDTLS IPLLEDERLL GVISVDNPVD GRYPDLGQIQ ALEFFADQAA
IAVGQVRATE ELRRYAETDA LTALANRRTF EASGAEALHD AQVEGRAVAV VFVDLDHFKA
LNDEYGHLAG DLALRASAEA LRSCLRARDL VARWGGEEFV ALVTDVELEW ARQLGEAIRA
SIASSVRAEV GVEASASVGV ALAESAETDA PDLRALLAAA DVALYLAKQR GRDRSEVVVR
RQDGTVRHVP
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