Gene Afer_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1182 
Symbol 
ID8323255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1235050 
End bp1235838 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content70% 
IMG OID644952312 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_003109787 
Protein GI256371963 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGAGC GTGAGCGTGC GCAAGTCCGG TCTCGTGGCG ATCGCCTCGA GGCGGTCGCC 
GAGCTGCTCG AGGCGTCGGA AGTCGAGGAG TCAGACCTCG GAACGTTGTC GCTCGAGGAC
GCCTACGAGG TGCAAGCGCG CCTGTGGGCA CGGCGCGACG CCCATGGGGC CGTGCGTTCG
GGGTGGAAAG TGGGCCTCAC TGACGAAGCG GCTCGGCGTC GCATGGGGCT CGAGGAGCCG
ATCTTCGGAC CACTCGCCGA GCATGACCGC ATCGGGTCAG GTAGCGACCT GTCGCTCGCG
CGGCTCGTCG ATCCGCGGCT CGAAGTCGAG GTGGCCCTGC GTGTGGCCGA GCGCATCCAG
GGGATTCTCG AGCCTGACGA AGTCGACGAC GTCGTCGACG AGCTGGCGGT TGCTTTCGAG
ATTCCCGACT CGCGGATCGT CGGTTGGCCG GTGCGGGGCA GAAGCCTCAT TGCCGATCGT
GCGGGAGCCG GCCTGTGGGT CCTCGGCGAC CGCGTGGCGA GCCGCGACGG CATCCCGTTC
GATCGCCTGG TCGCGATCGC CACGCGCGAC GGTACGGAGG TGGTCCGGGG CGGGTCCGAG
GCGGTGCTCG GCGATCCGCG GCGCTCGTTT GCGTGGTTGA CCGGTGCCGT AGCCCGCCAC
GGTGGTTCCC TCGAGCCCGG TGAGTGGGTG CTCGCCGGCA CCTTGACGCC GATGGTGCCG
CTCGTGCCGG GTCACTGGGA GGGGATCATC GAGGGCGTCG GGTCGGTCCG GCTCGTCGTG
GTGCCCTAG
 
Protein sequence
MVERERAQVR SRGDRLEAVA ELLEASEVEE SDLGTLSLED AYEVQARLWA RRDAHGAVRS 
GWKVGLTDEA ARRRMGLEEP IFGPLAEHDR IGSGSDLSLA RLVDPRLEVE VALRVAERIQ
GILEPDEVDD VVDELAVAFE IPDSRIVGWP VRGRSLIADR AGAGLWVLGD RVASRDGIPF
DRLVAIATRD GTEVVRGGSE AVLGDPRRSF AWLTGAVARH GGSLEPGEWV LAGTLTPMVP
LVPGHWEGII EGVGSVRLVV VP