| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1175 |
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| Symbol | |
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| ID | 8323248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1226154 |
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| End bp | 1227323 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952305 |
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| Product | osmosensitive K channel signal transduction histidine kinase, sensor subunit KdpD |
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| Protein accession | YP_003109780 |
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| Protein GI | 256371956 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCGA TCGACACGGA GGACGCCGAC CAGCTTGTCG CCACGCCCGA AGTCGAACCC
GTCGGCCGCT TCCGTATCTA CCTCGGTGCC ATGCCTGGCG TGGGCAAGAC GTGCGCCATG
CTCGACGAAG GCTTCCGACG GTTCCACCGG GGCGCGGACG TCGTGGTTGG CTTTGTGGAG
ACCCACGGCC GTGACTACAC CGCCTCGCTC GTTCGAGACC TCCCCGTCCT TGCCCGACGA
CGTGGGACCT ACCGCGGGCG CCCGGCAGAG GAGTTCGATC TCGAGGCCGC CCTCGCGCGC
AAACCCGAGG TCATCCTCGT CGACGAGCTC GCTCACACCA ACGTGCCCGG ACTCGGCGCC
CACGCCAAAC GCTACGAGGA TGTCGCGACG CTCCTCGAAG CCGGTATCTC CGTCATCACC
ACACTGAACG TCCAGCACAT CGAGAGCGTC GCCGCCCTCG TCGAGGACCT CCTCGGCGTG
CCCGTTCGCG AGCGCGTCCC CGATGCGGTG GTTCGAGCCG CCGATCAGAT CGAGCTCATC
GATTCCTCGC CACAAGCGCT CAGGCGCCGC CTCCTCCATG GCCACGTCTA CCCGCCCGAT
CGCATCGAGT GGGCACTCGA GCACTACTTC ACCACCCGCA ACCTCACCGT GCTCCGAGAG
CTCGCCCTGC GCTTCGTCGC CGACTCGCAG GTCCCGACCC CAACACTCGC GGTCGCATCC
CGGGCTCGTT GGCAGGCGAT CCTCGAGACC AAGGAGCGCT ACCTCGCCGG CGTCACGCTC
TCCGCGGCGT CGCCACGCGT GCTGCGACGC GCAGCCCGCA TGGCGCTCCG CAGCCACGCT
GACCTCTATG CGCTGTTCGT ACACCCCGAC GAGTACGATC CCACGCGCGA TGCGCCTCGC
CTCGACGCGC TCCGCACGCT CGCCGCCGAC CTCGGCGCGA TCCTCATCGA ACGTGACGGC
TCCGACATCG CGACGCTCCT CGTCGACGAG GCCCGCGCTC GCCAAGTCAC CCAGATCGTG
GTCGGCGCCT CGAGGCGCCG GCGCATCGAC GAGATCCTCC ACGGCTCCGT GCTGAACCGA
CTGCTGCGAC TCGCCGGACC GGTCGGGATC GACGTCCACG TCATCGGCGT TCGCGACTAC
GACCCGAGTC CGGATGAGTT CAACGGCTGA
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| Protein sequence | MDAIDTEDAD QLVATPEVEP VGRFRIYLGA MPGVGKTCAM LDEGFRRFHR GADVVVGFVE
THGRDYTASL VRDLPVLARR RGTYRGRPAE EFDLEAALAR KPEVILVDEL AHTNVPGLGA
HAKRYEDVAT LLEAGISVIT TLNVQHIESV AALVEDLLGV PVRERVPDAV VRAADQIELI
DSSPQALRRR LLHGHVYPPD RIEWALEHYF TTRNLTVLRE LALRFVADSQ VPTPTLAVAS
RARWQAILET KERYLAGVTL SAASPRVLRR AARMALRSHA DLYALFVHPD EYDPTRDAPR
LDALRTLAAD LGAILIERDG SDIATLLVDE ARARQVTQIV VGASRRRRID EILHGSVLNR
LLRLAGPVGI DVHVIGVRDY DPSPDEFNG
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