| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1114 |
|---|
| Symbol | |
|---|
| ID | 8323184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1160037 |
|---|
| End bp | 1161497 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644952242 |
|---|
| Product | pyruvate kinase |
|---|
| Protein accession | YP_003109720 |
|---|
| Protein GI | 256371896 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0469] Pyruvate kinase |
|---|
| TIGRFAM ID | [TIGR01064] pyruvate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.679316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGAGC ACCGGCGCAC GAAGATCGTT GCGAGTATTG GTCCGGCTTC ATCGAACCTC
GGGACCTTGA CGGCGATGAT CGAGGCTGGC ATGGATGTCG CGCGGATCAA CTGCTCACAC
GGCAGCACCG CAGACCATGC CCGCTCGATC GAGCTCGTTC GTCAAGCCGC TGCTCGGACC
GGCAAGACGG TCGGCGTGCT GCTCGATCTC GCCGGACCGA AGCTTCGGAT CGAGTCGCTG
GCCGACGACG CGACACAGCT CCAGCCCGGC GAGGTCGTCC AGATCGCCGA GGAGGGGAGC
GCCCGCCACG CCGCGATTCA CATCAGTCGG CTCGGCATCC TCCATACCGT GCCCCCAGGG
GCGACGATCG CCTTCGCTGA CGGCGCGGTC CGCCTCGTGG TCGACCGCTC GGAGGACGGC
TGGGTGGAGG CCACGGTCGT CCAGGGGGGG CCACTGTCGG TCCGCAAGGG CGTGAACTTC
CCGGATTCGT ATCTGGAGCT GCCCGCACTC ACCGAAGACG ACTTCGCCGA CATCGCCTTT
GGGCTGGAGG CGGGCGTCGA CTTCATCGCG CTGTCGTTCG TGGGCTCGGC CTCGGACCTC
GAGGTTGCTC GACGCCAGAT CGACCGCGCG GGCGCGGCGA GCCGCGTGAT GCTCGTTGCG
AAGATCGAGC GCAAGGAGGC GATCCAGCGC ATCGGCGAGA TCGTCGCTGC CTCGGACGCC
GTGATGGTCG CCCGCGGCGA TCTCGGAGTC GAGATGCCCG TCGAGCGGAT CCCACTCCTG
CAGAAGCAGA TCATCCACCT GGCCAACGAA GCCGGCAAGC CGGTGATCAC TGCGACCCAG
ATGCTCGAGT CGATGATCGA GGCGGGGTCG CCGACGAGGG CCGAGGCATC CGACGTCGCC
AACGCGATTC TCGATGGCTC GGACGCACTG ATGCTGTCGG CCGAGACGGC CGTTGGGGCC
TTTCCGGTCG AGGCCATCGC CACCATGGAT CGCATCGCGC GTGCGACCGA GCGCGAGGTG
GACAACCAGG CGCTCACGCT GCTCACGAGG CCCTCGCCTG TGGCCCACTC CGTCGCCGAT
GCGATCGGAG AGGCCGCCAC GCGGATGACT CGATCCGTCC CGGTGCGTGC GGTGGTGGCC
CTCACCGAGT CGGGACACAG TGCTCGGGTG CTGGCGCGCT TCCGTCCAGC GGTGGCGATC
CTCGGCGCGA CCCCCGATCC GCGCGCTGCG CGGTCGCTGA CACTGAGCTG GGGTGTCATC
CCGCACGTCG TGGCGAGGAC GCCGTCGACC GAGCTGATGG TGCACGAGGC GCTCGCGGCG
GCTGTCGAGC GAGGTCTCGC CGAGGTCGGC GAACTCGTCG TCATCGTGGC GGGCATCCCG
TTCGGTGTGC GTGGAACGAC GAACCTGATC AAGCTCCAGG CGGTGGGCGA CGGGTTCTTC
GCGCCGGCCG AGGGCGTCTA G
|
|---|
| Protein sequence | MREHRRTKIV ASIGPASSNL GTLTAMIEAG MDVARINCSH GSTADHARSI ELVRQAAART
GKTVGVLLDL AGPKLRIESL ADDATQLQPG EVVQIAEEGS ARHAAIHISR LGILHTVPPG
ATIAFADGAV RLVVDRSEDG WVEATVVQGG PLSVRKGVNF PDSYLELPAL TEDDFADIAF
GLEAGVDFIA LSFVGSASDL EVARRQIDRA GAASRVMLVA KIERKEAIQR IGEIVAASDA
VMVARGDLGV EMPVERIPLL QKQIIHLANE AGKPVITATQ MLESMIEAGS PTRAEASDVA
NAILDGSDAL MLSAETAVGA FPVEAIATMD RIARATEREV DNQALTLLTR PSPVAHSVAD
AIGEAATRMT RSVPVRAVVA LTESGHSARV LARFRPAVAI LGATPDPRAA RSLTLSWGVI
PHVVARTPST ELMVHEALAA AVERGLAEVG ELVVIVAGIP FGVRGTTNLI KLQAVGDGFF
APAEGV
|
|---|
| |