Gene Afer_1097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1097 
Symbol 
ID8323167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1142323 
End bp1143138 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content69% 
IMG OID644952225 
ProductIndole-3-glycerol-phosphate synthase 
Protein accessionYP_003109703 
Protein GI256371879 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGACT ACCTGACCGA CATCGTCGCC TACCATCGTC GGCGTGCCGC CTTGGACGAC 
GAGTCGTTCA CGAGTCTGCT CGCCGGACTC GACGCCATCG AGCCCCGCCC GAGCCTTCGC
TCGGCGCTCC TGGCATCGGC TGGCCTCGGT GTCGTCGCTG AGTTCAAGCG CCGCAGCCCG
TCGAAGGGCT GGTTCGTCGA GCCAGAGACC GACGTTGCGA CGCGAGTCTC GGCCTACGAG
CGAGCTGGGG CGGTCGCGGT CAGCGTGCTC ACGGACACAC CGCACTTCGG GGGCACCCTC
GCTGACCTCG AGCGAGCTGC GCAGCACGTC GAGCTTCCCA TCGTGCGCAA GGACTTCATC
GTCGACGCGA GGGAGCTTCT CCGGGCCCGT CGCGCGGGAG CGAGCGCGGT CTTGCTGATC
GCGGCGGCGC TCCAGCCGGA GGAGGTCGCA TCTCTCGCTG GTGTCGCCCA CGACGTCGGG
CTCGAGGTGC TCCTCGAGAT CCACGAGCTC AGCGAGCTCG AGCTTGCTGA GCTTGCCGCC
GCGGACGTCG TCGGCGTCAA TCAACGCGAC CTGACGAGTT TTCGCGTGGA CACCGATCGG
GCGCGTCGCG TGCTCGCGGC GCTCCCGCCG GGCGCGGCCA GGCTCGCTGA GTCGGGCGTG
CGTGGTCCCG ATGATCTCGC GGGGCTCGTG GGCTTCGACG GTGTCCTGAT CGGTGAGGCC
TGCATGCGTG CTCGGGACCC CTACGCGACC GTCCGGGCGC TCGTCGAGCG AGGTGCGAGT
GTTCATCAAG ATCTGCGGCA TCACGAATCA GTCTGA
 
Protein sequence
MADYLTDIVA YHRRRAALDD ESFTSLLAGL DAIEPRPSLR SALLASAGLG VVAEFKRRSP 
SKGWFVEPET DVATRVSAYE RAGAVAVSVL TDTPHFGGTL ADLERAAQHV ELPIVRKDFI
VDARELLRAR RAGASAVLLI AAALQPEEVA SLAGVAHDVG LEVLLEIHEL SELELAELAA
ADVVGVNQRD LTSFRVDTDR ARRVLAALPP GAARLAESGV RGPDDLAGLV GFDGVLIGEA
CMRARDPYAT VRALVERGAS VHQDLRHHES V