| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1080 |
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| Symbol | |
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| ID | 8323149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1123306 |
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| End bp | 1125966 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952208 |
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| Product | DNA polymerase I |
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| Protein accession | YP_003109687 |
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| Protein GI | 256371863 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCTCAG TCCCAGCTCC ACAACCGACT GACCGCCAGC TCCTCCTCCT GCTCGACGGC
TACTCACTCC TCTTTCGTGC TTTCTACGCC CTGCGGGAGC CGATGATGCG CACGGAGAGC
GGGGTCGCGA CCAACGCCCT GTTCGGGTTC GCGAGCATGC TCGCCAACGT CGTCGCCCAA
ACCCGGCCCA CGCACCTCGC GGTCGCGTTG GACGCGGAGG GCCCGACCTT TCGCGACGCC
ATCCTCGAGA GCTACAAGGG GACGAGGGCA CCGACCCCAG ATGACCTGCG ACAGCAGCTC
GATGCGGCTC GTGGGTTGCT CGAGGCGATC GGCGTCCCCG CTGTCGAGGC GAGCGGGTTC
GAAGCCGATG ACGTCATCGC AACCCTCGCC ACGCGCGCCC GCGACGCCGG GATCGCCACC
CGCATCGTGA CCGGCGATCG GGACCTCTTG CAGCTGGTCG AGGACCCGCT CATTGTGGTG
CTCCTCACGC GCAAGGGGGT CTCCAATCTC GAGGCCTTCG ATGAGGCCAA GGTCCTCGAG
ACCTACGGGG TTCCACCAGC CCGCTACGGC GATCTGGCCT CCCTGCGAGG GGATAGCTCC
GACAACCTCC CGGGCGTGCC AGGGATTGGG CCGAAGACCG CCGCCGCCCT GCTCGATCGG
TTCGAGTCGA TCGAAGGGAT CTTGGCTCAC CTCGATGCCC TCTCGGCGCG GCAACGCGAG
GCGCTGGAGC AGGCGCGCTC ACAGCTCCTC GAGGCACGCC TGCTGACGCA GCTGCGTCGA
GACGTCGCGG AGCTACCTTC CCTCGATGCG CTGCGACTCG GTCCGTGGGA CCCGCGGCGG
GCCGAGACGC TCATGGTGGG GACCTTCGAG CTGCGGCGTC CGTTTCAGGC CCTGGTGCGG
GCGTTCGAGG GTCGGCCGAC CGCCGGCGAC GAACCACCGC CGGTCGAGTC GCCGGTTGCG
CACCTCACCG ACGTCAGCGC CGCCGCCGTC GTCGAGCGGC TCGCACCAGG TGCCACGGTG
GCGGTGGCGG CTACGTTCGC TGGAGACCCC GGACGTAGCC GCGTGGTCGA GCTCGCGCTC
GGCGTCGAGG GCGTGGTTTG GGCGGGCTCT CCGGAGGATG CCCCCACGCA TCTGTGGGAG
GCCCTCGGGT CGTGCGTCCT CGTGGGAGCA GGCCCGAAGG AGATCGTGCG CTCGCTCGTG
ATGGAGCATG CGGTGCCGCT CGAGCCACGC GCGCTCGTCG ATCTCGAGGT GCTCGGGTGG
CTGGTCGACT CTGCGGACGT TGCTCACGGT CTCGACCAAC TGGCGCGGCG CTGGCTCGGG
AGACACCTCG ACGACCGGGG GCCCCTCGAA GCGGAAGCGG CGCCGCTCGG AGCGAGGCAG
TGGGTCGAGG TCGTCCATCC GATTCGCGAA GCGTTGGAGC GGCGCCTGAC GGAGGACGAT
CTGTGGCGTC TCGCGACCGA CGTGGAGATC CCGCTCACGC GAGTCCTGAC GGACATGGAG
ATCCATGGGG TAGCGATCGA CCGCGACGTC CTGGCGGCGA TCGGTACGGA GCTCGCCACC
GAGCGCGATC GTGCTCTCGC GGAGGTCCGG CACTACGCCG GTGGTGAGCT GAACCCGAAC
TCACCGCGCC AGCTCGCGGT GGTCCTGTTC GAGCGGCTTG GGTTGCCGGC AGGCCGGAAG
ACGAAGACGG GGTACTCGAC GGACGCCCGT GTGCTCGAGA GCTTGCGCGA CGCTCATCCC
ATCGTCGCGG CGATCCTTCG CTTTCGCGAG CTCGACAAGC TGCTGTCGAC GTTCTACGAA
GGTCTGCGCA GTGAGATCGG TGCCGACGGC CGCATCCACG CCACCTTCAA CCAGGCCGTC
GCACGCACGG GCCGGATCTC TTCCGAGCGA CCGAACCTCC AGAACATCCC GGTCCGTACC
GACGAGGGCA AGCGGTTCCG CGACGCCTTC GTGGCGACGG AGGGTCACGT GCTCGTGGCG
GCCGACTACT CACAGATCGA GCTCCGGGTC CTCGCACACC TGTCGGGCGA CGAGGAGCTG
GTACGGATCC TCTCGGGCGA TGGCGATGTC CACACCCTCG TGGCTGCGCG TGTCTTCGGC
GTACCAGCAG AGCGCGTCAC GCCGCAGCAG CGGTCGGTAG CCAAGATGGT GACCTATGGT
CTGTCCTATG GCATGGAGGC CTACGGCCTC GCCCAACGTC TTGGTGTCCC TCCCGCGGAG
GCCGAGGGGA TACTGGCAGA TTTCTTCGCG GCCTTTCCGG GGCTGCGGCA CTACCGCGAT
GCTTCCGTCG ATGCGGCGAG AGCGCAGGGT TTCACTACGA CGCTGCTCGG ACGGCGCCGC
TATCTCCCCG ACCTCGACTC ACCCAATCGC ACCGTTCGCC AAGGCGCCGA GCGGCAGGCG
ATGAACGCGG GGACACAGGG TCTTGCGGCC GACATCTTCA AGATCGCCCT GGTGCGCTTG
CACGCTGCGC TGAGCCCTAC CGATGGCGCA CTCGTGCTCC AAGTCCACGA CGAAGTCGTG
GTCGAGGCTG TCGCGGAGCG CGCGCACGAC GTCCGTGCCC TCGTCGAGGA CGTGCTCGAG
CACGCCTTTG CACTACGGGT GCCGCTGCGA GTACAGAGCG GCGTCGGCCG AAGTTGGGGT
CGTGCCAAAG CTGACGCATG A
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| Protein sequence | MSSVPAPQPT DRQLLLLLDG YSLLFRAFYA LREPMMRTES GVATNALFGF ASMLANVVAQ
TRPTHLAVAL DAEGPTFRDA ILESYKGTRA PTPDDLRQQL DAARGLLEAI GVPAVEASGF
EADDVIATLA TRARDAGIAT RIVTGDRDLL QLVEDPLIVV LLTRKGVSNL EAFDEAKVLE
TYGVPPARYG DLASLRGDSS DNLPGVPGIG PKTAAALLDR FESIEGILAH LDALSARQRE
ALEQARSQLL EARLLTQLRR DVAELPSLDA LRLGPWDPRR AETLMVGTFE LRRPFQALVR
AFEGRPTAGD EPPPVESPVA HLTDVSAAAV VERLAPGATV AVAATFAGDP GRSRVVELAL
GVEGVVWAGS PEDAPTHLWE ALGSCVLVGA GPKEIVRSLV MEHAVPLEPR ALVDLEVLGW
LVDSADVAHG LDQLARRWLG RHLDDRGPLE AEAAPLGARQ WVEVVHPIRE ALERRLTEDD
LWRLATDVEI PLTRVLTDME IHGVAIDRDV LAAIGTELAT ERDRALAEVR HYAGGELNPN
SPRQLAVVLF ERLGLPAGRK TKTGYSTDAR VLESLRDAHP IVAAILRFRE LDKLLSTFYE
GLRSEIGADG RIHATFNQAV ARTGRISSER PNLQNIPVRT DEGKRFRDAF VATEGHVLVA
ADYSQIELRV LAHLSGDEEL VRILSGDGDV HTLVAARVFG VPAERVTPQQ RSVAKMVTYG
LSYGMEAYGL AQRLGVPPAE AEGILADFFA AFPGLRHYRD ASVDAARAQG FTTTLLGRRR
YLPDLDSPNR TVRQGAERQA MNAGTQGLAA DIFKIALVRL HAALSPTDGA LVLQVHDEVV
VEAVAERAHD VRALVEDVLE HAFALRVPLR VQSGVGRSWG RAKADA
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