| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1078 |
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| Symbol | |
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| ID | 8323147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1120705 |
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| End bp | 1121694 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644952206 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003109685 |
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| Protein GI | 256371861 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACACG ACTCGAGTTC GATCATCCTG CGAGGGCGCG ACCAGATCAC GCACGACGCG
CTCGCACAAC AGCTTCGGCT CCTCAGGACC CACGCGGGCG CGATGGGTGT CGCCGTCGTG
CGGGTCGGAG ACGATGGGCG CGTCGTCATC GAGGCGCTCG ACATGGACCG AGCCCTCCTG
CGTGAGGGTG AGGAGATCGT CGTCACCGAC CCAAAGGTGC TGCCTGAGCG CGCAGACGCA
CCGAGTCTGC GACCGGGGCG CATCGAAAGC GACCTCTTGA CGTTCTCGCC ACTGCATGGT
CTCGTCCTCG TCCCCTTCGA GAGTCCACAG GACCAGTCGC TCGCACTCCT TGTGTTCGCT
GCGCGCCCGC TCCTCGTGAC CGACGACGCA CTGGTGCTTG CAGCCCGCAC CATCGAGACC
TTCCTGATCG CCGCGAGCCG CTTTACCGAG GAACTGCGCT ACCTGAAGGG CACCCTCACA
CAGTCGGAGT TCTACTCCGA CCGAGACCCC CTCACCCACG CGCTCAATCG TCGTGGTTTC
ATCGGCCTGC TGCATCGCCT CGAAGCCGAC TGGCCGCACC GGCGAATGGC CTACGCGATC
ATCGTGGCCG ACCTCGATCA TCTCAAGCAA GTGAACGACC ACCAAGGGCA TGCCGCCGGT
GACGCGCTGA TCCAGCGCTT CGTCGAGACC CTCCGCTCCA ACCTGCGTGA GCCGGAGAAC
GTCGGGCGTC TGGGGGGAGA TGAGTTTGCG GTCGTCGCCA AGCTCAGGAC ACCCGCCGAG
ACGCAGATCC TCCTGAACCG CTTGCGCACC GCACTCGACG CCGCGGGGAT CGCTGCCTCC
CTCGGAGCGG CGAGCCGCGA CGTCCCGATG CCGCTCGAGG AACTCCTCGT CCTCGCCGAC
CGAGCGATGT ACGACGACAA GTTCCGTCGC CACGAAGCCA TCGAGGGCAT CGAGGCCACG
GCACCATCGC TCTTCGAACC AACCCTCTAG
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| Protein sequence | MGHDSSSIIL RGRDQITHDA LAQQLRLLRT HAGAMGVAVV RVGDDGRVVI EALDMDRALL
REGEEIVVTD PKVLPERADA PSLRPGRIES DLLTFSPLHG LVLVPFESPQ DQSLALLVFA
ARPLLVTDDA LVLAARTIET FLIAASRFTE ELRYLKGTLT QSEFYSDRDP LTHALNRRGF
IGLLHRLEAD WPHRRMAYAI IVADLDHLKQ VNDHQGHAAG DALIQRFVET LRSNLREPEN
VGRLGGDEFA VVAKLRTPAE TQILLNRLRT ALDAAGIAAS LGAASRDVPM PLEELLVLAD
RAMYDDKFRR HEAIEGIEAT APSLFEPTL
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