| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1065 |
|---|
| Symbol | |
|---|
| ID | 8323130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 1105109 |
|---|
| End bp | 1106323 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644952190 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003109673 |
|---|
| Protein GI | 256371849 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.137002 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCCGC GTCCCGTCCG TCGTCGTCAC CTCGCTGGGG TCGTCCTCGC AGGCATTCCC
TTCAACGTGG CTCAGGGGGC CGCGTTCCCC TACTGGGTGC TGTATCTCCA CAGCGACCTG
CACTTCCCCA CCGCCTTGGC GGGTCTCGTG ATCGGCACCG AGGGTCTCGC CTCGCTCGGA
GGCGCGCTGG TCGGCGGGGC CTTCCAGGAT CACTTCGGGC CTCGACGAAC GGCGCAACTG
GGCGCAGTGA TCGAAGCCGT GGCCGCAGCG TCGCTTGTCG TTGCTCGTAG CCCGCTTGCG
GTCGCGGGCT GCTTCGTCCT CTTCGGTATG TCGACCTTGC GCTATCCGGC CCGATCGAGC
GCGCTCCTCG CCGCACTGCC GGACGATCTC TCGGCGACCA CCTTCTTTAG CTGGGACTTC
ATGGGCGCGA ACACCGGCTT CGGGCTCGGG ATCGTGGTCG GGGCGCTGCT CATCGGTGCC
GGTGACGCGA CGGTGATGCG GGGCTTGTTC GCCGCCCTCG CGGTGACGAG TGCCCTCCTC
GCCGTGACCT ACGAGCTCAT CCCGAACCAG AGAATGGCTC GCGAACACCT CGAGCACGCG
TCGTATCGCG CAGCCATGCG TTCGTCGCTG TTCTGGTACG TCGGCGCGTG GGGCCTGCTG
CTCTCGCTCG CGAGCTACTC GTCGTTCGAC GCTGGCGTGC CGGCCCTGAT CGGCATCGAG
CTCCACGCGT CGCCGCACCT GATCGCGCTC GGCTTTCTCA CGAATCCCGT GCTCATCGTC
GCGTTCCAGC AACCCGTGAG ACGCCTGGTC CACCGACTCC GGTGGCGCCG CGCAACCATG
GCGACCGCAG CGATCTTCGG CGCGTCGTGG TTCATCTTGT TCGGGGCCCT GTGGCTGCGG
ACCGAGTTCG AGCTCGCCGT CCTCGTCGTC AGCTTCGCCG CGACCTTCTC GCTCGCCGAG
ATGCTGATGG CTCCCCTTCG AACCCAGCTC ATCGCCGCGC TCGCACCTGA GCATCTCCGC
GGTCGCTTCT ACGGGATGAG CCACTTCGCC CGCGGTGTCG CCGGTCTCGT CGGGCCGAGC
GTCGCAGGGG CCATGATCGG TGCAGGCCTC GGCTTCTGGT GGCTGCCGCT CGTCGCGAGC
TCGGGTGCCG GTGCCGCCTG GGTCAGCCGA AAGATCTTTC GGACAGCTCC CGCCGAGCTG
TCCGAGCGCA CCTGA
|
|---|
| Protein sequence | MSPRPVRRRH LAGVVLAGIP FNVAQGAAFP YWVLYLHSDL HFPTALAGLV IGTEGLASLG
GALVGGAFQD HFGPRRTAQL GAVIEAVAAA SLVVARSPLA VAGCFVLFGM STLRYPARSS
ALLAALPDDL SATTFFSWDF MGANTGFGLG IVVGALLIGA GDATVMRGLF AALAVTSALL
AVTYELIPNQ RMAREHLEHA SYRAAMRSSL FWYVGAWGLL LSLASYSSFD AGVPALIGIE
LHASPHLIAL GFLTNPVLIV AFQQPVRRLV HRLRWRRATM ATAAIFGASW FILFGALWLR
TEFELAVLVV SFAATFSLAE MLMAPLRTQL IAALAPEHLR GRFYGMSHFA RGVAGLVGPS
VAGAMIGAGL GFWWLPLVAS SGAGAAWVSR KIFRTAPAEL SERT
|
|---|
| |