Gene Afer_1043 details

Gene Information

• Locus tag: Afer_1043
• ID: 8323107
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidimicrobium ferrooxidans DSM 10331
• Kingdom: Bacteria
• Replicon accession: NC_013124
• Strand: -
• Start bp: 1079347
• End bp: 1080111
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 644952170
• Product: ABC-2 type transporter
• Protein accession: YP_003109654
• Protein GI: 256371830

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGTGGT GGCGGATACG GGCGGTCATC GCCAAGGAGT TCACCGACTT TCGTCGGAAC 
CGCTACGTGC TCTACAGCAT GGTCGCTCTG CCCCTCATTT CGCTGGTCGC GCCGGTGCTC 
TCCCTGACCT CGCTGCCGGA AGCTGCCCCC ATGTCCCTCC TCGACAAGGT GACGACGGCG 
AGCAGCATCG AGTTCCTGCT CCCCCCGCTC GTGCTCCCGG GCGTGCTGGC GGGCTTTGCC 
ATCGTCGGCG AGCGGGATCA GGGGACGCTC GAGCCGCTGC TCAGCTCCCC CCTCAGCGCG 
ACCGAACTCT ACGTCGCCAA GCTGCTCGCC GTCCTCGCGC CGACGTTCAT CGGATCGTGG 
GGCCTGTACG CGCTCACCCT CGTCGTCGTT CACTTCGCAG CCGCCGCATC GGTCAGTGCC 
CATCTCATCA CCGCTCCCCT CGTCGTGCGT CAACTCGGCC TCGATGTGCT GCTCAGCGGT 
TGGGCGGTGC TGGTTGGACT GTTCGCATCC AGTCGTGCGA GTGATGTTCG CGTGGCACAG 
CAGCTCTCGG CGCTTGCGTC CGTCCCGGTC CTCCTCGTGA TCGTCTTACT CGTGCAAGGA 
GTTATCAGCC TGAGCGTGGC CGACGGCGTT GCACTCGCAG GTGCGCTCCT CCTCGTCGAG 
ATCGTCGGCC TCGCGGTGCT CGCGCGCACG TTCGACCCGG AACGACTCCT CGCTCCCCGG 
TCGCCTCGAC GGACCCGTTC GCGCGGGCGA GCGCTTCCGA CCTGA 

 

Protein sequence

MTWWRIRAVI AKEFTDFRRN RYVLYSMVAL PLISLVAPVL SLTSLPEAAP MSLLDKVTTA 
SSIEFLLPPL VLPGVLAGFA IVGERDQGTL EPLLSSPLSA TELYVAKLLA VLAPTFIGSW 
GLYALTLVVV HFAAAASVSA HLITAPLVVR QLGLDVLLSG WAVLVGLFAS SRASDVRVAQ 
QLSALASVPV LLVIVLLVQG VISLSVADGV ALAGALLLVE IVGLAVLART FDPERLLAPR 
SPRRTRSRGR ALPT